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Microbial defenses against mobile genetic elements and viruses: Who defends whom from what?
Microbial defenses against mobile genetic elements and viruses: Who defends whom from what?
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Microbial defenses against mobile genetic elements and viruses: Who defends whom from what?

Rocha, Eduardo P C ; Bikard, David

PLoS Biology, 2022-01, Vol.20 (1), p.e3001514-e3001514 [Peer Reviewed Journal]

United States: Public Library of Science

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2
The small, slow and specialized CRISPR and anti-CRISPR of Escherichia and Salmonella
The small, slow and specialized CRISPR and anti-CRISPR of Escherichia and Salmonella
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The small, slow and specialized CRISPR and anti-CRISPR of Escherichia and Salmonella

Touchon, Marie ; Rocha, Eduardo P C Randau, Lennart

PloS one, 2010-06, Vol.5 (6), p.e11126-e11126 [Peer Reviewed Journal]

United States: Public Library of Science

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3
Diversification of the type IV filament superfamily into machines for adhesion, protein secretion, DNA uptake, and motility
Diversification of the type IV filament superfamily into machines for adhesion, protein secretion, DNA uptake, and motility
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Diversification of the type IV filament superfamily into machines for adhesion, protein secretion, DNA uptake, and motility

Denise, Rémi ; Abby, Sophie S ; Rocha, Eduardo P C Beeby, Morgan

PLoS Biology, 2019-07, Vol.17 (7), p.e3000390-e3000390 [Peer Reviewed Journal]

United States: Public Library of Science

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4
Pathways for horizontal gene transfer in bacteria revealed by a global map of their plasmids
Pathways for horizontal gene transfer in bacteria revealed by a global map of their plasmids
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Pathways for horizontal gene transfer in bacteria revealed by a global map of their plasmids

Redondo-Salvo, Santiago ; Fernández-López, Raúl ; Ruiz, Raúl ; Vielva, Luis ; de Toro, María ; Rocha, Eduardo P. C. ; Garcillán-Barcia, M. Pilar ; de la Cruz, Fernando

Nature communications, 2020-07, Vol.11 (1), p.3602-3602, Article 3602 [Peer Reviewed Journal]

London: Nature Publishing Group

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5
Horizontal transfer, not duplication, drives the expansion of protein families in prokaryotes
Horizontal transfer, not duplication, drives the expansion of protein families in prokaryotes
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Horizontal transfer, not duplication, drives the expansion of protein families in prokaryotes

Treangen, Todd J ; Rocha, Eduardo P C Moran, Nancy A.

PLoS genetics, 2011-01, Vol.7 (1), p.e1001284 [Peer Reviewed Journal]

United States: Public Library of Science

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6
The chromosomal organization of horizontal gene transfer in bacteria
The chromosomal organization of horizontal gene transfer in bacteria
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The chromosomal organization of horizontal gene transfer in bacteria

Oliveira, Pedro H ; Touchon, Marie ; Cury, Jean ; Rocha, Eduardo P C

Nature communications, 2017-10, Vol.8 (1), p.841-11, Article 841 [Peer Reviewed Journal]

England: Nature Publishing Group

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7
The non-flagellar type III secretion system evolved from the bacterial flagellum and diversified into host-cell adapted systems
The non-flagellar type III secretion system evolved from the bacterial flagellum and diversified into host-cell adapted systems
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The non-flagellar type III secretion system evolved from the bacterial flagellum and diversified into host-cell adapted systems

Abby, Sophie S ; Rocha, Eduardo P C Achtman, Mark

PLoS genetics, 2012-09, Vol.8 (9), p.e1002983-e1002983 [Peer Reviewed Journal]

United States: Public Library of Science

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8
The interplay of restriction-modification systems with mobile genetic elements and their prokaryotic hosts
The interplay of restriction-modification systems with mobile genetic elements and their prokaryotic hosts
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The interplay of restriction-modification systems with mobile genetic elements and their prokaryotic hosts

Oliveira, Pedro H ; Touchon, Marie ; Rocha, Eduardo P C

Nucleic acids research, 2014-09, Vol.42 (16), p.10618-10631 [Peer Reviewed Journal]

England: Oxford University Press

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9
CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins
CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins
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CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins

Couvin, David ; Bernheim, Aude ; Toffano-Nioche, Claire ; Touchon, Marie ; Michalik, Juraj ; Néron, Bertrand ; Rocha, Eduardo P C ; Vergnaud, Gilles ; Gautheret, Daniel ; Pourcel, Christine

Nucleic acids research, 2018-07, Vol.46 (W1), p.W246-W251 [Peer Reviewed Journal]

England: Oxford University Press

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10
Neutral Theory, Microbial Practice: Challenges in Bacterial Population Genetics
Neutral Theory, Microbial Practice: Challenges in Bacterial Population Genetics
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Neutral Theory, Microbial Practice: Challenges in Bacterial Population Genetics

Rocha, Eduardo P C Kumar, Sudhir

Molecular biology and evolution, 2018-06, Vol.35 (6), p.1338-1347 [Peer Reviewed Journal]

United States: Oxford University Press (OUP)

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