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11 |
Material Type: Article
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CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteinsCouvin, David ; Bernheim, Aude ; Toffano-Nioche, Claire ; Touchon, Marie ; Michalik, Juraj ; Néron, Bertrand ; Rocha, Eduardo P C ; Vergnaud, Gilles ; Gautheret, Daniel ; Pourcel, ChristineNucleic acids research, 2018-07, Vol.46 (W1), p.W246-W251 [Peer Reviewed Journal]England: Oxford University PressFull text available |
12 |
Material Type: Article
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MacSyFinder: a program to mine genomes for molecular systems with an application to CRISPR-Cas systemsAbby, Sophie S ; Néron, Bertrand ; Ménager, Hervé ; Touchon, Marie ; Rocha, Eduardo P C Torres, Néstor V.PloS one, 2014-10, Vol.9 (10), p.e110726-e110726 [Peer Reviewed Journal]United States: Public Library of ScienceFull text available |
13 |
Material Type: Article
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Mobility of PlasmidsSMILLIE, Chris ; GARCILLAN-BARCIA, M. Pilar ; FRANCIA, M. Victoria ; ROCHA, Eduardo P. C ; DE LA CRUZ, FernandoMicrobiology and Molecular Biology Reviews, 2010-09, Vol.74 (3), p.434-452 [Peer Reviewed Journal]Washington, DC: American Society for MicrobiologyFull text available |
14 |
Material Type: Article
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Phage-plasmids promote recombination and emergence of phages and plasmidsPfeifer, Eugen ; Rocha, Eduardo P CNature communications, 2024-02, Vol.15 (1), p.1545-1545, Article 1545 [Peer Reviewed Journal]England: Nature Publishing GroupFull text available |
15 |
Material Type: Article
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Neutral Theory, Microbial Practice: Challenges in Bacterial Population GeneticsRocha, Eduardo P C Kumar, SudhirMolecular biology and evolution, 2018-06, Vol.35 (6), p.1338-1347 [Peer Reviewed Journal]United States: Oxford University Press (OUP)Full text available |
16 |
Material Type: Article
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Interplay between the cell envelope and mobile genetic elements shapes gene flow in populations of the nosocomial pathogen Klebsiella pneumoniaeHaudiquet, Matthieu ; Buffet, Amandine ; Rendueles, Olaya ; Rocha, Eduardo P. C. de Visser, J. Arjan G. M.PLoS biology, 2021-07, Vol.19 (7), p.e3001276-e3001276 [Peer Reviewed Journal]San Francisco: Public Library of ScienceFull text available |
17 |
Material Type: Article
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Integrative and conjugative elements and their hosts: composition, distribution and organizationCury, Jean ; Touchon, Marie ; Rocha, Eduardo P CNucleic acids research, 2017-09, Vol.45 (15), p.8943-8956 [Peer Reviewed Journal]England: Oxford University PressFull text available |
18 |
Material Type: Article
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The repertoire of ICE in prokaryotes underscores the unity, diversity, and ubiquity of conjugationGuglielmini, Julien ; Quintais, Leonor ; Garcillán-Barcia, Maria Pilar ; de la Cruz, Fernando ; Rocha, Eduardo P C Casadesús, JosepPLoS genetics, 2011-08, Vol.7 (8), p.e1002222-e1002222 [Peer Reviewed Journal]United States: Public Library of ScienceFull text available |
19 |
Material Type: Article
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The systemic imprint of growth and its uses in ecological (meta)genomicsVieira-Silva, Sara ; Rocha, Eduardo P C Moran, Nancy A.PLoS genetics, 2010-01, Vol.6 (1), p.e1000808 [Peer Reviewed Journal]United States: Public Library of ScienceFull text available |
20 |
Material Type: Article
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A Computational Approach Applied to the Study of Potential Allosteric Inhibitors Protease NS2B/NS3 from Dengue VirusCosta, Renato A. da ; Rocha, João A. P. da ; Pinheiro, Alan S. ; Costa, Andréia do S. S. da ; Rocha, Elaine C. M. da ; Silva, Rai. C. ; Gonçalves, Arlan da S. ; Santos, Cleydson B. R. ; Brasil, Davi do S. B.Molecules (Basel, Switzerland), 2022-06, Vol.27 (13), p.4118 [Peer Reviewed Journal]Basel: MDPI AGFull text available |