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Serverification of molecular modeling applications: the Rosetta Online Server that Includes Everyone (ROSIE)
Serverification of molecular modeling applications: the Rosetta Online Server that Includes Everyone (ROSIE)
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Serverification of molecular modeling applications: the Rosetta Online Server that Includes Everyone (ROSIE)

Lyskov, Sergey ; Chou, Fang-Chieh ; Conchúir, Shane Ó ; Der, Bryan S ; Drew, Kevin ; Kuroda, Daisuke ; Xu, Jianqing ; Weitzner, Brian D ; Renfrew, P Douglas ; Sripakdeevong, Parin ; Borgo, Benjamin ; Havranek, James J ; Kuhlman, Brian ; Kortemme, Tanja ; Bonneau, Richard ; Gray, Jeffrey J ; Das, Rhiju Uversky, Vladimir N.

PloS one, 2013-05, Vol.8 (5), p.e63906-e63906 [Periódico revisado por pares]

United States: Public Library of Science

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2
Incorporation of noncanonical amino acids into Rosetta and use in computational protein-peptide interface design
Incorporation of noncanonical amino acids into Rosetta and use in computational protein-peptide interface design
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Incorporation of noncanonical amino acids into Rosetta and use in computational protein-peptide interface design

Renfrew, P Douglas ; Choi, Eun Jung ; Bonneau, Richard ; Kuhlman, Brian Uversky, Vladimir N.

PloS one, 2012-03, Vol.7 (3), p.e32637-e32637 [Periódico revisado por pares]

United States: Public Library of Science

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3
Adding diverse noncanonical backbones to rosetta: enabling peptidomimetic design
Adding diverse noncanonical backbones to rosetta: enabling peptidomimetic design
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Adding diverse noncanonical backbones to rosetta: enabling peptidomimetic design

Drew, Kevin ; Renfrew, P Douglas ; Craven, Timothy W ; Butterfoss, Glenn L ; Chou, Fang-Chieh ; Lyskov, Sergey ; Bullock, Brooke N ; Watkins, Andrew ; Labonte, Jason W ; Pacella, Michael ; Kilambi, Krishna Praneeth ; Leaver-Fay, Andrew ; Kuhlman, Brian ; Gray, Jeffrey J ; Bradley, Philip ; Kirshenbaum, Kent ; Arora, Paramjit S ; Das, Rhiju ; Bonneau, Richard Uversky, Vladimir N.

PloS one, 2013-07, Vol.8 (7), p.e67051 [Periódico revisado por pares]

United States: Public Library of Science

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4
A comprehensive software suite for protein family construction and functional site prediction
A comprehensive software suite for protein family construction and functional site prediction
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A comprehensive software suite for protein family construction and functional site prediction

Haft, David Renfrew ; Haft, Daniel H Lespinet, Olivier

PloS one, 2017-02, Vol.12 (2), p.e0171758-e0171758 [Periódico revisado por pares]

United States: Public Library of Science

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5
The 2010 Rosetta developers meeting: macromolecular prediction and design meets reproducible publishing
The 2010 Rosetta developers meeting: macromolecular prediction and design meets reproducible publishing
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The 2010 Rosetta developers meeting: macromolecular prediction and design meets reproducible publishing

Renfrew, P Douglas ; Campbell, Gabrielle ; Strauss, Charlie E M ; Bonneau, Richard Uversky, Vladimir N.

PloS one, 2011-08, Vol.6 (8), p.e22431-e22431 [Periódico revisado por pares]

United States: Public Library of Science

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6
Population differentiation of southern Indian male lineages correlates with agricultural expansions predating the caste system
Population differentiation of southern Indian male lineages correlates with agricultural expansions predating the caste system
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Population differentiation of southern Indian male lineages correlates with agricultural expansions predating the caste system

Arunkumar, Ganeshprasad ; Soria-Hernanz, David F ; Kavitha, Valampuri John ; Arun, Varatharajan Santhakumari ; Syama, Adhikarla ; Ashokan, Kumaran Samy ; Gandhirajan, Kavandanpatti Thangaraj ; Vijayakumar, Koothapuli ; Narayanan, Muthuswamy ; Jayalakshmi, Mariakuttikan ; Ziegle, Janet S ; Royyuru, Ajay K ; Parida, Laxmi ; Wells, R Spencer ; Renfrew, Colin ; Schurr, Theodore G ; Smith, Chris Tyler ; Platt, Daniel E ; Pitchappan, Ramasamy Kayser, Manfred

PloS one, 2012-11, Vol.7 (11), p.e50269-e50269 [Periódico revisado por pares]

United States: Public Library of Science

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7
Genetic Heritage of the Balto-Slavic Speaking Populations: A Synthesis of Autosomal, Mitochondrial and Y-Chromosomal Data
Genetic Heritage of the Balto-Slavic Speaking Populations: A Synthesis of Autosomal, Mitochondrial and Y-Chromosomal Data
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Genetic Heritage of the Balto-Slavic Speaking Populations: A Synthesis of Autosomal, Mitochondrial and Y-Chromosomal Data

Kushniarevich, Alena ; Utevska, Olga ; Chuhryaeva, Marina ; Agdzhoyan, Anastasia ; Dibirova, Khadizhat ; Uktveryte, Ingrida ; Möls, Märt ; Mulahasanovic, Lejla ; Pshenichnov, Andrey ; Frolova, Svetlana ; Shanko, Andrey ; Metspalu, Ene ; Reidla, Maere ; Tambets, Kristiina ; Tamm, Erika ; Koshel, Sergey ; Zaporozhchenko, Valery ; Atramentova, Lubov ; Kučinskas, Vaidutis ; Davydenko, Oleg ; Goncharova, Olga ; Evseeva, Irina ; Churnosov, Michail ; Pocheshchova, Elvira ; Yunusbayev, Bayazit ; Khusnutdinova, Elza ; Marjanović, Damir ; Rudan, Pavao ; Rootsi, Siiri ; Yankovsky, Nick ; Endicott, Phillip ; Kassian, Alexei ; Dybo, Anna ; Tyler-Smith, Chris ; Balanovska, Elena ; Metspalu, Mait ; Kivisild, Toomas ; Villems, Richard ; Balanovsky, Oleg Calafell, Francesc

PloS one, 2015-09, Vol.10 (9), p.e0135820-e0135820 [Periódico revisado por pares]

United States: Public Library of Science

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8
Assessing regional and interspecific variation in threshold responses of forest breeding birds through broad scale analyses
Assessing regional and interspecific variation in threshold responses of forest breeding birds through broad scale analyses
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Assessing regional and interspecific variation in threshold responses of forest breeding birds through broad scale analyses

van der Hoek, Yntze ; Renfrew, Rosalind ; Manne, Lisa L Lindborg, Regina

PloS one, 2013-02, Vol.8 (2), p.e55996-e55996 [Periódico revisado por pares]

United States: Public Library of Science

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9
Uniparental markers in Italy reveal a sex-biased genetic structure and different historical strata
Uniparental markers in Italy reveal a sex-biased genetic structure and different historical strata
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Uniparental markers in Italy reveal a sex-biased genetic structure and different historical strata

Boattini, Alessio ; Martinez-Cruz, Begoña ; Sarno, Stefania ; Harmant, Christine ; Useli, Antonella ; Sanz, Paula ; Yang-Yao, Daniele ; Manry, Jeremy ; Ciani, Graziella ; Luiselli, Donata ; Quintana-Murci, Lluis ; Comas, David ; Pettener, Davide Caramelli, David

PloS one, 2013-05, Vol.8 (5), p.e65441-e65441 [Periódico revisado por pares]

United States: Public Library of Science

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10
Mitochondrial genome sequencing in Mesolithic North East Europe Unearths a new sub-clade within the broadly distributed human haplogroup C1
Mitochondrial genome sequencing in Mesolithic North East Europe Unearths a new sub-clade within the broadly distributed human haplogroup C1
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Mitochondrial genome sequencing in Mesolithic North East Europe Unearths a new sub-clade within the broadly distributed human haplogroup C1

Der Sarkissian, Clio ; Brotherton, Paul ; Balanovsky, Oleg ; Templeton, Jennifer E L ; Llamas, Bastien ; Soubrier, Julien ; Moiseyev, Vyacheslav ; Khartanovich, Valery ; Cooper, Alan ; Haak, Wolfgang Achilli, Alessandro

PloS one, 2014-02, Vol.9 (2), p.e87612-e87612 [Periódico revisado por pares]

United States: Public Library of Science

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