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Refinado por: assunto: Mathematical & Computational Biology remover Nome da Publicação: Journal Of Computational Biology remover
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MiCId GUI: The Graphical User Interface for MiCId, a Fast Microorganism Classification and Identification Workflow with Accurate Statistics and High Recall
MiCId GUI: The Graphical User Interface for MiCId, a Fast Microorganism Classification and Identification Workflow with Accurate Statistics and High Recall
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MiCId GUI: The Graphical User Interface for MiCId, a Fast Microorganism Classification and Identification Workflow with Accurate Statistics and High Recall

Ogurtsov, Aleksey ; Alves, Gelio ; Rubio, Alex ; Joyce, Brendan ; Andersson, Björn ; Karlsson, Roger ; Moore, Edward R B ; Yu, Yi-Kuo

Journal of computational biology, 2024-02, Vol.31 (2), p.175-178 [Periódico revisado por pares]

United States: Mary Ann Liebert, Inc., publishers

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2
cutPrimers: A New Tool for Accurate Cutting of Primers from Reads of Targeted Next Generation Sequencing
cutPrimers: A New Tool for Accurate Cutting of Primers from Reads of Targeted Next Generation Sequencing
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cutPrimers: A New Tool for Accurate Cutting of Primers from Reads of Targeted Next Generation Sequencing

Kechin, Andrey ; Boyarskikh, Uljana ; Kel, Alexander ; Filipenko, Maxim

Journal of computational biology, 2017-11, Vol.24 (11), p.1138-1143 [Periódico revisado por pares]

United States

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3
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing
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SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

Bankevich, Anton ; Nurk, Sergey ; Antipov, Dmitry ; Gurevich, Alexey A ; Dvorkin, Mikhail ; Kulikov, Alexander S ; Lesin, Valery M ; Nikolenko, Sergey I ; Pham, Son ; Prjibelski, Andrey D ; Pyshkin, Alexey V ; Sirotkin, Alexander V ; Vyahhi, Nikolay ; Tesler, Glenn ; Alekseyev, Max A ; Pevzner, Pavel A

Journal of computational biology, 2012-05, Vol.19 (5), p.455-477 [Periódico revisado por pares]

United States: Mary Ann Liebert, Inc

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4
Analysis of the Physicochemical Properties of Acaricides Based on Lipinski's Rule of Five
Analysis of the Physicochemical Properties of Acaricides Based on Lipinski's Rule of Five
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Analysis of the Physicochemical Properties of Acaricides Based on Lipinski's Rule of Five

Chen, Xiaoxia ; Li, Hao ; Tian, Lichao ; Li, Qinwei ; Luo, Jinxiang ; Zhang, Yongqiang

Journal of computational biology, 2020-09, Vol.27 (9), p.1397-1406 [Periódico revisado por pares]

United States

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5
Shared Nearest Neighbor Clustering in a Locality Sensitive Hashing Framework
Shared Nearest Neighbor Clustering in a Locality Sensitive Hashing Framework
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Shared Nearest Neighbor Clustering in a Locality Sensitive Hashing Framework

Kanj, Sawsan ; Brüls, Thomas ; Gazut, Stéphane

Journal of computational biology, 2018-02, Vol.25 (2), p.236-250 [Periódico revisado por pares]

United States: Mary Ann Liebert

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6
Assembling single-cell genomes and mini-metagenomes from chimeric MDA products
Assembling single-cell genomes and mini-metagenomes from chimeric MDA products
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Assembling single-cell genomes and mini-metagenomes from chimeric MDA products

Nurk, Sergey ; Bankevich, Anton ; Antipov, Dmitry ; Gurevich, Alexey A ; Korobeynikov, Anton ; Lapidus, Alla ; Prjibelski, Andrey D ; Pyshkin, Alexey ; Sirotkin, Alexander ; Sirotkin, Yakov ; Stepanauskas, Ramunas ; Clingenpeel, Scott R ; Woyke, Tanja ; McLean, Jeffrey S ; Lasken, Roger ; Tesler, Glenn ; Alekseyev, Max A ; Pevzner, Pavel A

Journal of computational biology, 2013-10, Vol.20 (10), p.714-737 [Periódico revisado por pares]

United States: Mary Ann Liebert, Inc

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7
PASTA: Ultra-Large Multiple Sequence Alignment for Nucleotide and Amino-Acid Sequences
PASTA: Ultra-Large Multiple Sequence Alignment for Nucleotide and Amino-Acid Sequences
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PASTA: Ultra-Large Multiple Sequence Alignment for Nucleotide and Amino-Acid Sequences

Mirarab, Siavash ; Nguyen, Nam ; Guo, Sheng ; Wang, Li-San ; Kim, Junhyong ; Warnow, Tandy

Journal of computational biology, 2015-05, Vol.22 (5), p.377-386 [Periódico revisado por pares]

United States: Mary Ann Liebert, Inc

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8
A Computational-Based Method for Predicting Drug-Target Interactions by Using Stacked Autoencoder Deep Neural Network
A Computational-Based Method for Predicting Drug-Target Interactions by Using Stacked Autoencoder Deep Neural Network
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A Computational-Based Method for Predicting Drug-Target Interactions by Using Stacked Autoencoder Deep Neural Network

Wang, Lei ; You, Zhu-Hong ; Chen, Xing ; Xia, Shi-Xiong ; Liu, Feng ; Yan, Xin ; Zhou, Yong ; Song, Ke-Jian

Journal of computational biology, 2018-03, Vol.25 (3), p.361-373 [Periódico revisado por pares]

United States

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9
iRNA-2OM: A Sequence-Based Predictor for Identifying 2'-O-Methylation Sites in Homo sapiens
iRNA-2OM: A Sequence-Based Predictor for Identifying 2'-O-Methylation Sites in Homo sapiens
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iRNA-2OM: A Sequence-Based Predictor for Identifying 2'-O-Methylation Sites in Homo sapiens

Yang, Hui ; Lv, Hao ; Ding, Hui ; Chen, Wei ; Lin, Hao

Journal of computational biology, 2018-11, Vol.25 (11), p.1266-1277 [Periódico revisado por pares]

United States

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10
WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads
WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads
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WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads

Patterson, Murray ; Marschall, Tobias ; Pisanti, Nadia ; van Iersel, Leo ; Stougie, Leen ; Klau, Gunnar W ; Schönhuth, Alexander

Journal of computational biology, 2015-06, Vol.22 (6), p.498-509 [Periódico revisado por pares]

United States: Mary Ann Liebert

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