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Genome-driven evolutionary game theory helps understand the rise of metabolic interdependencies in microbial communities
Genome-driven evolutionary game theory helps understand the rise of metabolic interdependencies in microbial communities
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Genome-driven evolutionary game theory helps understand the rise of metabolic interdependencies in microbial communities

Zomorrodi, Ali R ; Segrè, Daniel

Nature communications, 2017-11, Vol.8 (1), p.1563-12, Article 1563 [Periódico revisado por pares]

England: Nature Publishing Group

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2
Costless metabolic secretions as drivers of interspecies interactions in microbial ecosystems
Costless metabolic secretions as drivers of interspecies interactions in microbial ecosystems
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Costless metabolic secretions as drivers of interspecies interactions in microbial ecosystems

Pacheco, Alan R ; Moel, Mauricio ; Segrè, Daniel

Nature communications, 2019-01, Vol.10 (1), p.103-103, Article 103 [Periódico revisado por pares]

England: Nature Publishing Group

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3
Non-additive microbial community responses to environmental complexity
Non-additive microbial community responses to environmental complexity
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Non-additive microbial community responses to environmental complexity

Pacheco, Alan R ; Osborne, Melisa L ; Segrè, Daniel

Nature communications, 2021-04, Vol.12 (1), p.2365-2365, Article 2365 [Periódico revisado por pares]

England: Nature Publishing Group

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4
Deep sequencing of the oral microbiome reveals signatures of periodontal disease
Deep sequencing of the oral microbiome reveals signatures of periodontal disease
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Deep sequencing of the oral microbiome reveals signatures of periodontal disease

Liu, Bo ; Faller, Lina L ; Klitgord, Niels ; Mazumdar, Varun ; Ghodsi, Mohammad ; Sommer, Daniel D ; Gibbons, Theodore R ; Treangen, Todd J ; Chang, Yi-Chien ; Li, Shan ; Stine, O Colin ; Hasturk, Hatice ; Kasif, Simon ; Segrè, Daniel ; Pop, Mihai ; Amar, Salomon Highlander, Sarah K.

PloS one, 2012-06, Vol.7 (6), p.e37919 [Periódico revisado por pares]

United States: Public Library of Science

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5
Hierarchical expression of genes controlled by the Bacillus subtilis global regulatory protein CodY
Hierarchical expression of genes controlled by the Bacillus subtilis global regulatory protein CodY
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Hierarchical expression of genes controlled by the Bacillus subtilis global regulatory protein CodY

Brinsmade, Shaun R. ; Alexander, Elizabeth L. ; Livny, Jonathan ; Stettner, Arion I. ; Segrè, Daniel ; Rhee, Kyu Y. ; Sonenshein, Abraham L.

Proceedings of the National Academy of Sciences - PNAS, 2014-06, Vol.111 (22), p.8227-8232 [Periódico revisado por pares]

United States: National Academy of Sciences

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6
Visualization of Metabolic Interaction Networks in Microbial Communities Using VisANT 5.0
Visualization of Metabolic Interaction Networks in Microbial Communities Using VisANT 5.0
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Visualization of Metabolic Interaction Networks in Microbial Communities Using VisANT 5.0

Granger, Brian R ; Chang, Yi-Chien ; Wang, Yan ; DeLisi, Charles ; Segrè, Daniel ; Hu, Zhenjun Prlic, Andreas

PLoS computational biology, 2016-04, Vol.12 (4), p.e1004875-e1004875 [Periódico revisado por pares]

United States: Public Library of Science

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7
Integrative genomics reveals novel molecular pathways and gene networks for coronary artery disease
Integrative genomics reveals novel molecular pathways and gene networks for coronary artery disease
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Integrative genomics reveals novel molecular pathways and gene networks for coronary artery disease

Mäkinen, Ville-Petteri ; Civelek, Mete ; Meng, Qingying ; Zhang, Bin ; Zhu, Jun ; Levian, Candace ; Huan, Tianxiao ; Segrè, Ayellet V ; Ghosh, Sujoy ; Vivar, Juan ; Nikpay, Majid ; Stewart, Alexandre F R ; Nelson, Christopher P ; Willenborg, Christina ; Erdmann, Jeanette ; Blakenberg, Stefan ; O'Donnell, Christopher J ; März, Winfried ; Laaksonen, Reijo ; Epstein, Stephen E ; Kathiresan, Sekar ; Shah, Svati H ; Hazen, Stanley L ; Reilly, Muredach P ; Lusis, Aldons J ; Samani, Nilesh J ; Schunkert, Heribert ; Quertermous, Thomas ; McPherson, Ruth ; Yang, Xia ; Assimes, Themistocles L Attie, Alan

PLoS genetics, 2014-07, Vol.10 (7), p.e1004502-e1004502 [Periódico revisado por pares]

United States: Public Library of Science

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8
Integrative Genomics Reveals Novel Molecular Pathways and Gene Networks for Coronary Artery Disease: e1004502
Integrative Genomics Reveals Novel Molecular Pathways and Gene Networks for Coronary Artery Disease: e1004502
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Integrative Genomics Reveals Novel Molecular Pathways and Gene Networks for Coronary Artery Disease: e1004502

Mäkinen, Ville-Petteri ; Civelek, Mete ; Meng, Qingying ; Zhang, Bin ; Zhu, Jun ; Levian, Candace ; Huan, Tianxiao ; Segrè, Ayellet V ; Ghosh, Sujoy ; Vivar, Juan ; Nikpay, Majid ; Stewart, Alexandre FR ; Nelson, Christopher P ; Willenborg, Christina ; Erdmann, Jeanette ; Blakenberg, Stefan ; März, Winfried ; Laaksonen, Reijo ; Epstein, Stephen E ; Kathiresan, Sekar ; Shah, Svati H ; Hazen, Stanley L ; Reilly, Muredach P ; Lusis, Aldons J ; Samani, Nilesh J ; Schunkert, Heribert ; Quertermous, Thomas ; McPherson, Ruth ; Yang, Xia ; Assimes, Themistocles L ; Replication, ARtery DIseaseGenome-Wide

PLoS genetics, 2014-07, Vol.10 (7) [Periódico revisado por pares]

San Francisco: Public Library of Science

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