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Material Type: Artigo
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Mechanism and Catalytic Site Atlas (M-CSA): a database of enzyme reaction mechanisms and active sitesRibeiro, António J M ; Holliday, Gemma L ; Furnham, Nicholas ; Tyzack, Jonathan D ; Ferris, Katherine ; Thornton, Janet MNucleic acids research, 2018-01, Vol.46 (D1), p.D618-D623 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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The Catalytic Site Atlas 2.0: cataloging catalytic sites and residues identified in enzymesFurnham, Nicholas ; Holliday, Gemma L ; de Beer, Tjaart A P ; Jacobsen, Julius O B ; Pearson, William R ; Thornton, Janet MNucleic acids research, 2014-01, Vol.42 (Database issue), p.D485-D489 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structuresSillitoe, Ian ; Cuff, Alison L ; Dessailly, Benoit H ; Dawson, Natalie L ; Furnham, Nicholas ; Lee, David ; Lees, Jonathan G ; Lewis, Tony E ; Studer, Romain A ; Rentzsch, Robert ; Yeats, Corin ; Thornton, Janet M ; Orengo, Christine ANucleic acids research, 2013-01, Vol.41 (Database issue), p.D490-D498 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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GRaSP-web: a machine learning strategy to predict binding sites based on residue neighborhood graphsSantana, Charles A ; Izidoro, Sandro C ; de Melo-Minardi, Raquel C ; Tyzack, Jonathan D ; Ribeiro, António J M ; Pires, Douglas E V ; Thornton, Janet M ; de A. Silveira, SabrinaNucleic acids research, 2022-07, Vol.50 (W1), p.W392-W397 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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PDBsum additionsde Beer, Tjaart A P ; Berka, Karel ; Thornton, Janet M ; Laskowski, Roman ANucleic acids research, 2014-01, Vol.42 (Database issue), p.D292-D296 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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ProFunc: a server for predicting protein function from 3D structureLaskowski, Roman A. ; Watson, James D. ; Thornton, Janet M.Nucleic acids research, 2005-07, Vol.33 (suppl-2), p.W89-W93 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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The Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural dataPorter, Craig T. ; Bartlett, Gail J. ; Thornton, Janet M.Nucleic acids research, 2004-01, Vol.32 (suppl-1), p.D129-D133 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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PDBsum more: new summaries and analyses of the known 3D structures of proteins and nucleic acidsLaskowski, Roman A. ; Chistyakov, Victor V. ; Thornton, Janet M.Nucleic acids research, 2005-01, Vol.33 (suppl-1), p.D266-D268 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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Amino acid-base interactions: a three-dimensional analysis of protein-DNA interactions at an atomic levelLuscombe, N M ; Laskowski, R A ; Thornton, J MNucleic acids research, 2001-07, Vol.29 (13), p.2860-2874 [Periódico revisado por pares]England: Oxford Publishing Limited (England)Texto completo disponível |
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Material Type: Artigo
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cuRRBS: simple and robust evaluation of enzyme combinations for reduced representation approachesMartin-Herranz, Daniel E ; Ribeiro, António J M ; Krueger, Felix ; Thornton, Janet M ; Reik, Wolf ; Stubbs, Thomas MNucleic acids research, 2017-11, Vol.45 (20), p.11559-11569 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |