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1
Microbial defenses against mobile genetic elements and viruses: Who defends whom from what?
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Microbial defenses against mobile genetic elements and viruses: Who defends whom from what?

Rocha, Eduardo P C ; Bikard, David

PLoS biology, 2022-01, Vol.20 (1), p.e3001514-e3001514 [Periódico revisado por pares]

United States: Public Library of Science

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2
Diversification of the type IV filament superfamily into machines for adhesion, protein secretion, DNA uptake, and motility
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Diversification of the type IV filament superfamily into machines for adhesion, protein secretion, DNA uptake, and motility

Denise, Rémi ; Abby, Sophie S ; Rocha, Eduardo P C Beeby, Morgan

PLoS biology, 2019-07, Vol.17 (7), p.e3000390-e3000390 [Periódico revisado por pares]

United States: Public Library of Science

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3
Interplay between the cell envelope and mobile genetic elements shapes gene flow in populations of the nosocomial pathogen Klebsiella pneumoniae
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Interplay between the cell envelope and mobile genetic elements shapes gene flow in populations of the nosocomial pathogen Klebsiella pneumoniae

Haudiquet, Matthieu ; Buffet, Amandine ; Rendueles, Olaya ; Rocha, Eduardo P. C. de Visser, J. Arjan G. M.

PLoS biology, 2021-07, Vol.19 (7), p.e3001276-e3001276 [Periódico revisado por pares]

San Francisco: Public Library of Science

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4
Key components of the eight classes of type IV secretion systems involved in bacterial conjugation or protein secretion
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Key components of the eight classes of type IV secretion systems involved in bacterial conjugation or protein secretion

Guglielmini, Julien ; Néron, Bertrand ; Abby, Sophie S ; Garcillán-Barcia, María Pilar ; la Cruz, Fernando de ; Rocha, Eduardo P. C

Nucleic acids research, 2014-05, Vol.42 (9), p.5715-5727 [Periódico revisado por pares]

England: Oxford University Press

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5
Using Sex to Cure the Genome
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Using Sex to Cure the Genome

Rocha, Eduardo P C

PLoS biology, 2016-03, Vol.14 (3), p.e1002417-e1002417 [Periódico revisado por pares]

United States: Public Library of Science

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6
Identification and characterization of thousands of bacteriophage satellites across bacteria
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Identification and characterization of thousands of bacteriophage satellites across bacteria

de Sousa, Jorge A Moura ; Fillol-Salom, Alfred ; Penadés, José R ; Rocha, Eduardo P C

Nucleic acids research, 2023-04, Vol.51 (6), p.2759-2777 [Periódico revisado por pares]

England: Oxford University Press

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7
Transient hypermutagenesis accelerates the evolution of legume endosymbionts following horizontal gene transfer
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Transient hypermutagenesis accelerates the evolution of legume endosymbionts following horizontal gene transfer

Remigi, Philippe ; Capela, Delphine ; Clerissi, Camille ; Tasse, Léna ; Torchet, Rachel ; Bouchez, Olivier ; Batut, Jacques ; Cruveiller, Stéphane ; Rocha, Eduardo P C ; Masson-Boivin, Catherine Dangl, Jeffery L.

PLoS biology, 2014-09, Vol.12 (9), p.e1001942 [Periódico revisado por pares]

United States: Public Library of Science

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8
Analysis of 3D genomic interactions identifies candidate host genes that transposable elements potentially regulate
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Analysis of 3D genomic interactions identifies candidate host genes that transposable elements potentially regulate

Raviram, Ramya ; Rocha, Pedro P ; Luo, Vincent M ; Swanzey, Emily ; Miraldi, Emily R ; Chuong, Edward B ; Feschotte, Cédric ; Bonneau, Richard ; Skok, Jane A

Genome Biology, 2018-12, Vol.19 (1), p.216-216, Article 216 [Periódico revisado por pares]

England: BioMed Central

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9
IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata
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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata

Camargo, Antonio Pedro ; Call, Lee ; Roux, Simon ; Nayfach, Stephen ; Huntemann, Marcel ; Palaniappan, Krishnaveni ; Ratner, Anna ; Chu, Ken ; Mukherjeep, Supratim ; Reddy, T B K ; Chen, I-Min A ; Ivanova, Natalia N ; Eloe-Fadrosh, Emiley A ; Woyke, Tanja ; Baltrus, David A ; Castañeda-Barba, Salvador ; de la Cruz, Fernando ; Funnell, Barbara E ; Hall, James P J ; Mukhopadhyay, Aindrila ; Rocha, Eduardo P C ; Stalder, Thibault ; Top, Eva ; Kyrpides, Nikos C

Nucleic acids research, 2024-01, Vol.52 (D1), p.D164-D173 [Periódico revisado por pares]

England: Oxford University Press

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10
Identification of multi-loci hubs from 4C-seq demonstrates the functional importance of simultaneous interactions
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Identification of multi-loci hubs from 4C-seq demonstrates the functional importance of simultaneous interactions

Jiang, Tingting ; Raviram, Ramya ; Snetkova, Valentina ; Rocha, Pedro P ; Proudhon, Charlotte ; Badri, Sana ; Bonneau, Richard ; Skok, Jane A ; Kluger, Yuval

Nucleic acids research, 2016-10, Vol.44 (18), p.8714-8725 [Periódico revisado por pares]

England: Oxford University Press

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