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The effect of human mobility and control measures on the COVID-19 epidemic in China
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The effect of human mobility and control measures on the COVID-19 epidemic in China

Kraemer, Moritz U G ; Yang, Chia-Hung ; Gutierrez, Bernardo ; Wu, Chieh-Hsi ; Klein, Brennan ; Pigott, David M ; du Plessis, Louis ; Faria, Nuno R ; Li, Ruoran ; Hanage, William P ; Brownstein, John S ; Layan, Maylis ; Vespignani, Alessandro ; Tian, Huaiyu ; Dye, Christopher ; Pybus, Oliver G ; Scarpino, Samuel V

Science (American Association for the Advancement of Science), 2020-05, Vol.368 (6490), p.493-497 [Periódico revisado por pares]

United States: The American Association for the Advancement of Science

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Interpreting the genomic landscape of speciation: a road map for finding barriers to gene flow
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Interpreting the genomic landscape of speciation: a road map for finding barriers to gene flow

Ravinet, M. ; Faria, R. ; Butlin, R. K. ; Galindo, J. ; Bierne, N. ; Rafajlović, M. ; Noor, M. A. F. ; Mehlig, B. ; Westram, A. M.

Journal of evolutionary biology, 2017-08, Vol.30 (8), p.1450-1477 [Periódico revisado por pares]

Switzerland: Blackwell Publishing Ltd

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3
Improving Bayesian Population Dynamics Inference: A Coalescent-Based Model for Multiple Loci
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Improving Bayesian Population Dynamics Inference: A Coalescent-Based Model for Multiple Loci

Gill, M. S. ; Lemey, P. ; Faria, N. R. ; Rambaut, A. ; Shapiro, B. ; Suchard, M. A.

Molecular biology and evolution, 2013-03, Vol.30 (3), p.713-724 [Periódico revisado por pares]

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4
Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples
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Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples

Quick, Joshua ; Grubaugh, Nathan D ; Pullan, Steven T ; Claro, Ingra M ; Smith, Andrew D ; Gangavarapu, Karthik ; Oliveira, Glenn ; Robles-Sikisaka, Refugio ; Rogers, Thomas F ; Beutler, Nathan A ; Burton, Dennis R ; Lewis-Ximenez, Lia Laura ; de Jesus, Jaqueline Goes ; Giovanetti, Marta ; Hill, Sarah C ; Black, Allison ; Bedford, Trevor ; Carroll, Miles W ; Nunes, Marcio ; Alcantara, Jr, Luiz Carlos ; Sabino, Ester C ; Baylis, Sally A ; Faria, Nuno R ; Loose, Matthew ; Simpson, Jared T ; Pybus, Oliver G ; Andersen, Kristian G ; Loman, Nicholas J

Nature protocols, 2017-06, Vol.12 (6), p.1261-1276 [Periódico revisado por pares]

England: Nature Publishing Group

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5
Resurgence of COVID-19 in Manaus, Brazil, despite high seroprevalence
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Resurgence of COVID-19 in Manaus, Brazil, despite high seroprevalence

Sabino, Ester C ; Buss, Lewis F ; Carvalho, Maria P S ; Prete, Carlos A ; Crispim, Myuki A E ; Fraiji, Nelson A ; Pereira, Rafael H M ; Parag, Kris V ; da Silva Peixoto, Pedro ; Kraemer, Moritz U G ; Oikawa, Marcio K ; Salomon, Tassila ; Cucunuba, Zulma M ; Castro, Márcia C ; de Souza Santos, Andreza Aruska ; Nascimento, Vítor H ; Pereira, Henrique S ; Ferguson, Neil M ; Pybus, Oliver G ; Kucharski, Adam ; Busch, Michael P ; Dye, Christopher ; Faria, Nuno R

The Lancet (British edition), 2021-02, Vol.397 (10273), p.452-455 [Periódico revisado por pares]

England: Elsevier Ltd

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6
Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence
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Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B.1.1.7 emergence

Kraemer, Moritz U G ; Hill, Verity ; Ruis, Christopher ; Dellicour, Simon ; Bajaj, Sumali ; McCrone, John T ; Baele, Guy ; Parag, Kris V ; Battle, Anya Lindström ; Gutierrez, Bernardo ; Jackson, Ben ; Colquhoun, Rachel ; O'Toole, Áine ; Klein, Brennan ; Vespignani, Alessandro ; Volz, Erik ; Faria, Nuno R ; Aanensen, David M ; Loman, Nicholas J ; du Plessis, Louis ; Cauchemez, Simon ; Rambaut, Andrew ; Scarpino, Samuel V ; Pybus, Oliver G

Science (American Association for the Advancement of Science), 2021-08, Vol.373 (6557), p.889-895 [Periódico revisado por pares]

United States: The American Association for the Advancement of Science

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7
Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK
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Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK

du Plessis, Louis ; McCrone, John T ; Zarebski, Alexander E ; Hill, Verity ; Ruis, Christopher ; Gutierrez, Bernardo ; Raghwani, Jayna ; Ashworth, Jordan ; Colquhoun, Rachel ; Connor, Thomas R ; Faria, Nuno R ; Jackson, Ben ; Loman, Nicholas J ; O'Toole, Áine ; Nicholls, Samuel M ; Parag, Kris V ; Scher, Emily ; Vasylyeva, Tetyana I ; Volz, Erik M ; Watts, Alexander ; Bogoch, Isaac I ; Khan, Kamran ; Aanensen, David M ; Kraemer, Moritz U G ; Rambaut, Andrew ; Pybus, Oliver G

Science (American Association for the Advancement of Science), 2021-02, Vol.371 (6530), p.708-712 [Periódico revisado por pares]

United States: The American Association for the Advancement of Science

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8
The early spread and epidemic ignition of HIV-1 in human populations
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The early spread and epidemic ignition of HIV-1 in human populations

Faria, Nuno R. ; Rambaut, Andrew ; Suchard, Marc A. ; Baele, Guy ; Bedford, Trevor ; J. Ward, Melissa ; Tatem, Andrew J. ; Sousa, João D. ; Arinaminpathy, Nimalan ; Pépin, Jacques ; Posada, David ; Peeters, Martine ; Pybus, Oliver G. ; Lemey, Philippe

Science (American Association for the Advancement of Science), 2014-10, Vol.346 (6205), p.56-61 [Periódico revisado por pares]

Washington: American Association for the Advancement of Science

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9
SERAPHIM: studying environmental rasters and phylogenetically informed movements
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SERAPHIM: studying environmental rasters and phylogenetically informed movements

Dellicour, Simon ; Rose, Rebecca ; Faria, Nuno R ; Lemey, Philippe ; Pybus, Oliver G

Bioinformatics (Oxford, England), 2016-10, Vol.32 (20), p.3204-3206 [Periódico revisado por pares]

England

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10
Genomic Epidemiology of SARS-CoV-2 in Guangdong Province, China
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Genomic Epidemiology of SARS-CoV-2 in Guangdong Province, China

Lu, Jing ; du Plessis, Louis ; Liu, Zhe ; Hill, Verity ; Kang, Min ; Lin, Huifang ; Sun, Jiufeng ; François, Sarah ; Kraemer, Moritz U.G. ; Faria, Nuno R. ; McCrone, John T. ; Peng, Jinju ; Xiong, Qianling ; Yuan, Runyu ; Zeng, Lilian ; Zhou, Pingping ; Liang, Chumin ; Yi, Lina ; Liu, Jun ; Xiao, Jianpeng ; Hu, Jianxiong ; Liu, Tao ; Ma, Wenjun ; Li, Wei ; Su, Juan ; Zheng, Huanying ; Peng, Bo ; Fang, Shisong ; Su, Wenzhe ; Li, Kuibiao ; Sun, Ruilin ; Bai, Ru ; Tang, Xi ; Liang, Minfeng ; Quick, Josh ; Song, Tie ; Rambaut, Andrew ; Loman, Nick ; Raghwani, Jayna ; Pybus, Oliver G. ; Ke, Changwen

Cell, 2020-05, Vol.181 (5), p.997-1003.e9 [Periódico revisado por pares]

United States: Elsevier Inc

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