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When and How the Perfect Phylogeny Model Explains Evolution
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When and How the Perfect Phylogeny Model Explains Evolution

Bonizzoni, Paola ; Przytycka, Teresa ; Paola Carrieri, Anna ; Dondi, Riccardo ; Della Vedova, Gianluca

Discrete and Topological Models in Molecular Biology, 2014, p.67-83

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Deconstructing Complex Nonlinear Models in System Design Space
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Deconstructing Complex Nonlinear Models in System Design Space

G. Lomnitz, Jason ; A. Savageau, Michael

Discrete and Topological Models in Molecular Biology, 2014, p.475-506

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The Role of Symmetry in Conformational Changes of Viral Capsids: A Mathematical Approach
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The Role of Symmetry in Conformational Changes of Viral Capsids: A Mathematical Approach

Twarock, Reidun ; Cermelli, Paolo ; Indelicato, Giuliana

Discrete and Topological Models in Molecular Biology, 2014, p.217-240

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Algebraic Models and Their Use in Systems Biology
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Algebraic Models and Their Use in Systems Biology

Hinkelmann, Franziska ; Veliz-Cuba, Alan ; Murrugarra, David ; Laubenbacher, Reinhard

Discrete and Topological Models in Molecular Biology, 2014, p.443-474

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Redundant and Critical Noncovalent Interactions in Protein Rigid Cluster Analysis
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Redundant and Critical Noncovalent Interactions in Protein Rigid Cluster Analysis

Streinu, Ileana ; Fox, Naomi

Discrete and Topological Models in Molecular Biology, 2014, p.167-196

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IBCell Morphocharts: A Computational Model for Linking Cell Molecular Activity with Emerging Tissue Morphology
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IBCell Morphocharts: A Computational Model for Linking Cell Molecular Activity with Emerging Tissue Morphology

A. Rejniak, Katarzyna

Discrete and Topological Models in Molecular Biology, 2014, p.507-524

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The Algebra of Gene Assembly in Ciliates
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The Algebra of Gene Assembly in Ciliates

Jan Hoogeboom, Hendrik ; Brijder, Robert

Discrete and Topological Models in Molecular Biology, 2014, p.289-307

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Site-Specific Recombination on Unknot and Unlink Substrates Producing Two-Bridge Links
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Site-Specific Recombination on Unknot and Unlink Substrates Producing Two-Bridge Links

L. Baker, Kenneth

Discrete and Topological Models in Molecular Biology, 2014, p.363-386

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Invariants of Graphs Modeling Nucleotide Rearrangements
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Invariants of Graphs Modeling Nucleotide Rearrangements

Dolzhenko, Egor ; Valencia, Karin

Discrete and Topological Models in Molecular Biology, 2014, p.309-323

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Minimal Tile and Bond-Edge Types for Self-Assembling DNA Graphs
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Minimal Tile and Bond-Edge Types for Self-Assembling DNA Graphs

Ellis-Monaghan, Joanna ; Pangborn, Greta ; Beaudin, Laura ; Bruno, Nick ; Miller, David ; Hashimoto, Akie

Discrete and Topological Models in Molecular Biology, 2014, p.241-270

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