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21
KMC 3: counting and manipulating k-mer statistics
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KMC 3: counting and manipulating k-mer statistics

Kokot, Marek ; Dlugosz, Maciej ; Deorowicz, Sebastian Berger, Bonnie

Bioinformatics (Oxford, England), 2017-09, Vol.33 (17), p.2759-2761 [Periódico revisado por pares]

England

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22
MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization
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MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization

Katoh, Kazutaka ; Rozewicki, John ; Yamada, Kazunori D

Briefings in bioinformatics, 2019-07, Vol.20 (4), p.1160-1166 [Periódico revisado por pares]

England: Oxford University Press

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23
Icy: an open bioimage informatics platform for extended reproducible research
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Icy: an open bioimage informatics platform for extended reproducible research

de Chaumont, Fabrice ; Dallongeville, Stéphane ; Chenouard, Nicolas ; Hervé, Nicolas ; Pop, Sorin ; Provoost, Thomas ; Meas-Yedid, Vannary ; Pankajakshan, Praveen ; Lecomte, Timothée ; Le Montagner, Yoann ; Lagache, Thibault ; Dufour, Alexandre ; Olivo-Marin, Jean-Christophe

Nature methods, 2012-07, Vol.9 (7), p.690-696 [Periódico revisado por pares]

United States: Nature Publishing Group

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24
WGCNA: an R package for weighted correlation network analysis
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WGCNA: an R package for weighted correlation network analysis

Langfelder, Peter ; Horvath, Steve

BMC bioinformatics, 2008-12, Vol.9 (1), p.559-559, Article 559 [Periódico revisado por pares]

England: BioMed Central Ltd

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25
Fast mapping of short sequences with mismatches, insertions and deletions using index structures
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Fast mapping of short sequences with mismatches, insertions and deletions using index structures

Hoffmann, Steve ; Otto, Christian ; Kurtz, Stefan ; Sharma, Cynthia M ; Khaitovich, Philipp ; Vogel, Jörg ; Stadler, Peter F ; Hackermüller, Jörg Searls, David B.

PLoS computational biology, 2009-09, Vol.5 (9), p.e1000502-e1000502 [Periódico revisado por pares]

United States: Public Library of Science

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26
CD-HIT: accelerated for clustering the next-generation sequencing data
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CD-HIT: accelerated for clustering the next-generation sequencing data

Fu, Limin ; Niu, Beifang ; Zhu, Zhengwei ; Wu, Sitao ; Li, Weizhong

Bioinformatics, 2012-12, Vol.28 (23), p.3150-3152 [Periódico revisado por pares]

Oxford: Oxford University Press

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27
cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination
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cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination

Punjani, Ali ; Rubinstein, John L ; Fleet, David J ; Brubaker, Marcus A

Nature methods, 2017-03, Vol.14 (3), p.290-296 [Periódico revisado por pares]

United States: Nature Publishing Group

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28
The effects of alignment quality, distance calculation method, sequence filtering, and region on the analysis of 16S rRNA gene-based studies
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The effects of alignment quality, distance calculation method, sequence filtering, and region on the analysis of 16S rRNA gene-based studies

Schloss, Patrick D Eisen, Jonathan A.

PLoS computational biology, 2010-07, Vol.6 (7), p.e1000844-e1000844 [Periódico revisado por pares]

United States: Public Library of Science

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29
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
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Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

KEARSE, Matthew ; MOIR, Richard ; THIERER, Tobias ; ASHTON, Bruce ; MEINTJES, Peter ; DRUMMOND, Alexei ; WILSON, Amy ; STONES-HAVAS, Steven ; CHEUNG, Matthew ; STURROCK, Shane ; BUXTON, Simon ; COOPER, Alex ; MARKOWITZ, Sidney ; DURAN, Chris

Bioinformatics (Oxford, England), 2012-06, Vol.28 (12), p.1647-1649 [Periódico revisado por pares]

Oxford: Oxford University Press

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30
Prediction of protein binding regions in disordered proteins
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Prediction of protein binding regions in disordered proteins

Mészáros, Bálint ; Simon, István ; Dosztányi, Zsuzsanna Casadio, Rita

PLoS computational biology, 2009-05, Vol.5 (5), p.e1000376-e1000376 [Periódico revisado por pares]

United States: Public Library of Science

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