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Integrating Transcriptomic and Proteomic Data Using Predictive Regulatory Network Models of Host Response to Pathogens
Integrating Transcriptomic and Proteomic Data Using Predictive Regulatory Network Models of Host Response to Pathogens
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Integrating Transcriptomic and Proteomic Data Using Predictive Regulatory Network Models of Host Response to Pathogens

Chasman, Deborah ; Walters, Kevin B ; Lopes, Tiago J S ; Eisfeld, Amie J ; Kawaoka, Yoshihiro ; Roy, Sushmita Leslie, Christina S.

PLoS computational biology, 2016-07, Vol.12 (7), p.e1005013-e1005013 [Periódico revisado por pares]

United States: Public Library of Science

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2
Tasting to preserve: An educational activity to promote children's positive attitudes towards intraspecific diversity conservation
Tasting to preserve: An educational activity to promote children's positive attitudes towards intraspecific diversity conservation
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Tasting to preserve: An educational activity to promote children's positive attitudes towards intraspecific diversity conservation

Pessoa, Patrícia ; Aboim, Sara ; Afonso, Lisa ; Lopes, J Bernardino ; Sá-Pinto, Xana Pal, Biswajit

PloS one, 2024-01, Vol.19 (1), p.e0285649-e0285649 [Periódico revisado por pares]

United States: Public Library of Science

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3
Adding protein context to the human protein-protein interaction network to reveal meaningful interactions
Adding protein context to the human protein-protein interaction network to reveal meaningful interactions
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Adding protein context to the human protein-protein interaction network to reveal meaningful interactions

Schaefer, Martin H ; Lopes, Tiago J S ; Mah, Nancy ; Shoemaker, Jason E ; Matsuoka, Yukiko ; Fontaine, Jean-Fred ; Louis-Jeune, Caroline ; Eisfeld, Amie J ; Neumann, Gabriele ; Perez-Iratxeta, Carol ; Kawaoka, Yoshihiro ; Kitano, Hiroaki ; Andrade-Navarro, Miguel A Rzhetsky, Andrey

PLoS computational biology, 2013-01, Vol.9 (1), p.e1002860-e1002860 [Periódico revisado por pares]

United States: Public Library of Science

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4
Molecular parallelisms between pigmentation in the avian iris and the integument of ectothermic vertebrates
Molecular parallelisms between pigmentation in the avian iris and the integument of ectothermic vertebrates
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Molecular parallelisms between pigmentation in the avian iris and the integument of ectothermic vertebrates

Andrade, Pedro ; Gazda, Małgorzata A ; Araújo, Pedro M ; Afonso, Sandra ; Rasmussen, Jacob A ; Marques, Cristiana I ; Lopes, Ricardo J ; Gilbert, M Thomas P ; Carneiro, Miguel Dyer, Kelly A.

PLoS genetics, 2021-02, Vol.17 (2), p.e1009404 [Periódico revisado por pares]

United States: Public Library of Science

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5
A reaction-diffusion network model predicts a dual role of Cactus/IκB to regulate Dorsal/NFκB nuclear translocation in Drosophila
A reaction-diffusion network model predicts a dual role of Cactus/IκB to regulate Dorsal/NFκB nuclear translocation in Drosophila
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A reaction-diffusion network model predicts a dual role of Cactus/IκB to regulate Dorsal/NFκB nuclear translocation in Drosophila

Barros, Claudio D. T. ; Cardoso, Maira A. ; Bisch, Paulo M. ; Araujo, Helena M. ; Lopes, Francisco J. P. Umulis, David

PLoS computational biology, 2021-05, Vol.17 (5), p.e1009040-e1009040 [Periódico revisado por pares]

San Francisco: Public Library of Science

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6
Geographic patterns of mtDNA and Z-linked sequence variation in the Common Chiffchaff and the 'chiffchaff complex'
Geographic patterns of mtDNA and Z-linked sequence variation in the Common Chiffchaff and the 'chiffchaff complex'
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Geographic patterns of mtDNA and Z-linked sequence variation in the Common Chiffchaff and the 'chiffchaff complex'

Raković, Marko ; Neto, Júlio M ; Lopes, Ricardo J ; Koblik, Evgeniy A ; Fadeev, Igor V ; Lohman, Yuriy V ; Aghayan, Sargis A ; Boano, Giovanni ; Pavia, Marco ; Perlman, Yoav ; Kiat, Yosef ; Ben Dov, Amir ; Collinson, J Martin ; Voelker, Gary ; Drovetski, Sergei V Chiang, Tzen-Yuh

PloS one, 2019-01, Vol.14 (1), p.e0210268-e0210268 [Periódico revisado por pares]

United States: Public Library of Science

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7
Gene expression noise in spatial patterning: hunchback promoter structure affects noise amplitude and distribution in Drosophila segmentation
Gene expression noise in spatial patterning: hunchback promoter structure affects noise amplitude and distribution in Drosophila segmentation
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Gene expression noise in spatial patterning: hunchback promoter structure affects noise amplitude and distribution in Drosophila segmentation

Holloway, David M ; Lopes, Francisco J P ; da Fontoura Costa, Luciano ; Travençolo, Bruno A N ; Golyandina, Nina ; Usevich, Konstantin ; Spirov, Alexander V Zhang, Weixiong

PLoS computational biology, 2011-02, Vol.7 (2), p.e1001069-e1001069 [Periódico revisado por pares]

United States: Public Library of Science

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8
Spatial bistability generates hunchback expression sharpness in the Drosophila embryo
Spatial bistability generates hunchback expression sharpness in the Drosophila embryo
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Spatial bistability generates hunchback expression sharpness in the Drosophila embryo

Lopes, Francisco J P ; Vieira, Fernando M C ; Holloway, David M ; Bisch, Paulo M ; Spirov, Alexander V Ohler, Uwe

PLoS computational biology, 2008-09, Vol.4 (9), p.e1000184-e1000184 [Periódico revisado por pares]

United States: Public Library of Science

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9
Political orientation, moral foundations, and COVID-19 social distancing
Political orientation, moral foundations, and COVID-19 social distancing
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Political orientation, moral foundations, and COVID-19 social distancing

Tarry, Hammond ; Vézina, Valérie ; Bailey, Jacob ; Lopes, Leah Tu, Wen-Jun

PloS one, 2022-06, Vol.17 (6), p.e0267136-e0267136 [Periódico revisado por pares]

San Francisco: Public Library of Science

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10
Correction: Differentiation of Bacillus pumilus and Bacillus safensis Using MALDI-TOF-MS
Correction: Differentiation of Bacillus pumilus and Bacillus safensis Using MALDI-TOF-MS
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Correction: Differentiation of Bacillus pumilus and Bacillus safensis Using MALDI-TOF-MS

PloS one, 2014-12, Vol.9 (12), p.e116426 [Periódico revisado por pares]

San Francisco: Public Library of Science

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