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1
CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins
CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins
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CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins

Couvin, David ; Bernheim, Aude ; Toffano-Nioche, Claire ; Touchon, Marie ; Michalik, Juraj ; Néron, Bertrand ; Rocha, Eduardo P C ; Vergnaud, Gilles ; Gautheret, Daniel ; Pourcel, Christine

Nucleic acids research, 2018-07, Vol.46 (W1), p.W246-W251 [Periódico revisado por pares]

England: Oxford University Press

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2
Phage-Plasmids Spread Antibiotic Resistance Genes through Infection and Lysogenic Conversion
Phage-Plasmids Spread Antibiotic Resistance Genes through Infection and Lysogenic Conversion
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Phage-Plasmids Spread Antibiotic Resistance Genes through Infection and Lysogenic Conversion

Pfeifer, Eugen ; Bonnin, Rémy A. ; Rocha, Eduardo P. C. Goldman, Gustavo H.

mBio, 2022-10, Vol.13 (5), p.e0185122-e0185122 [Periódico revisado por pares]

1752 N St., N.W., Washington, DC: American Society for Microbiology

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3
Key components of the eight classes of type IV secretion systems involved in bacterial conjugation or protein secretion
Key components of the eight classes of type IV secretion systems involved in bacterial conjugation or protein secretion
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Key components of the eight classes of type IV secretion systems involved in bacterial conjugation or protein secretion

Guglielmini, Julien ; Néron, Bertrand ; Abby, Sophie S ; Garcillán-Barcia, María Pilar ; la Cruz, Fernando de ; Rocha, Eduardo P. C

Nucleic acids research, 2014-05, Vol.42 (9), p.5715-5727 [Periódico revisado por pares]

England: Oxford University Press

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4
Competition between lysogenic and sensitive bacteria is determined by the fitness costs of the different emerging phage-resistance strategies
Competition between lysogenic and sensitive bacteria is determined by the fitness costs of the different emerging phage-resistance strategies
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Competition between lysogenic and sensitive bacteria is determined by the fitness costs of the different emerging phage-resistance strategies

Rendueles, Olaya ; de Sousa, Jorge A M ; Rocha, Eduardo P C

eLife, 2023-03, Vol.12 [Periódico revisado por pares]

England: eLife Sciences Publication

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5
Structural and Genomic Evolution of RRNPPA Systems and Their Pheromone Signaling
Structural and Genomic Evolution of RRNPPA Systems and Their Pheromone Signaling
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Structural and Genomic Evolution of RRNPPA Systems and Their Pheromone Signaling

Felipe-Ruiz, Alonso ; Marina, Alberto ; Rocha, Eduardo P C Brennan, Richard Gerald

mBio, 2022-12, Vol.13 (6), p.e0251422-e0251422 [Periódico revisado por pares]

United States: American Society for Microbiology

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6
Atypical organizations and epistatic interactions of CRISPRs and cas clusters in genomes and their mobile genetic elements
Atypical organizations and epistatic interactions of CRISPRs and cas clusters in genomes and their mobile genetic elements
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Atypical organizations and epistatic interactions of CRISPRs and cas clusters in genomes and their mobile genetic elements

Bernheim, Aude ; Bikard, David ; Touchon, Marie ; Rocha, Eduardo P C

Nucleic acids research, 2020-01, Vol.48 (2), p.748-760 [Periódico revisado por pares]

England: Oxford University Press

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7
Bacteria have numerous distinctive groups of phage–plasmids with conserved phage and variable plasmid gene repertoires
Bacteria have numerous distinctive groups of phage–plasmids with conserved phage and variable plasmid gene repertoires
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Bacteria have numerous distinctive groups of phage–plasmids with conserved phage and variable plasmid gene repertoires

Pfeifer, Eugen ; Moura de Sousa, Jorge A ; Touchon, Marie ; Rocha, Eduardo P C

Nucleic acids research, 2021-03, Vol.49 (5), p.2655-2673 [Periódico revisado por pares]

England: Oxford University Press

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8
Microglia Activation in Basal Ganglia Is a Late Event in Huntington Disease Pathophysiology
Microglia Activation in Basal Ganglia Is a Late Event in Huntington Disease Pathophysiology
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Microglia Activation in Basal Ganglia Is a Late Event in Huntington Disease Pathophysiology

Rocha, Natalia P ; Charron, Odelin ; Latham, Leigh B ; Colpo, Gabriela D ; Zanotti-Fregonara, Paolo ; Yu, Meixiang ; Freeman, Leorah ; Furr Stimming, Erin ; Teixeira, Antonio L

Neurology : neuroimmunology & neuroinflammation, 2021-05, Vol.8 (3) [Periódico revisado por pares]

United States: Lippincott Williams & Wilkins

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9
Differences in Integron Cassette Excision Dynamics Shape a Trade-Off between Evolvability and Genetic Capacitance
Differences in Integron Cassette Excision Dynamics Shape a Trade-Off between Evolvability and Genetic Capacitance
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Differences in Integron Cassette Excision Dynamics Shape a Trade-Off between Evolvability and Genetic Capacitance

Loot, Céline ; Nivina, Aleksandra ; Cury, Jean ; Escudero, José Antonio ; Ducos-Galand, Magaly ; Bikard, David ; Rocha, Eduardo P C ; Mazel, Didier Davies, Julian E.

mBio, 2017-03, Vol.8 (2), p.e02296-16 [Periódico revisado por pares]

United States: American Society for Microbiology

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10
Monocyte and Lymphocyte Activation in Bipolar Disorder: A New Piece in the Puzzle of Immune Dysfunction in Mood Disorders
Monocyte and Lymphocyte Activation in Bipolar Disorder: A New Piece in the Puzzle of Immune Dysfunction in Mood Disorders
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Monocyte and Lymphocyte Activation in Bipolar Disorder: A New Piece in the Puzzle of Immune Dysfunction in Mood Disorders

Barbosa, Izabela Guimarães ; Rocha, Natália Pessoa ; Assis, Frankcinéia ; Vieira, Érica Leandro Marciano ; Soares, Jair C ; Bauer, Moises Evandro ; Teixeira, Antônio Lúcio

The international journal of neuropsychopharmacology, 2015-01, Vol.18 (1), p.pyu021-pyu021 [Periódico revisado por pares]

US: Oxford University Press

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