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1
Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes
Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes
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Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes

Donath, Alexander ; Jühling, Frank ; Al-Arab, Marwa ; Bernhart, Stephan H ; Reinhardt, Franziska ; Stadler, Peter F ; Middendorf, Martin ; Bernt, Matthias

Nucleic acids research, 2019-11, Vol.47 (20), p.10543-10552 [Periódico revisado por pares]

England: Oxford University Press

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2
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations
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An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations

Clavijo, Bernardo J ; Venturini, Luca ; Schudoma, Christian ; Accinelli, Gonzalo Garcia ; Kaithakottil, Gemy ; Wright, Jonathan ; Borrill, Philippa ; Kettleborough, George ; Heavens, Darren ; Chapman, Helen ; Lipscombe, James ; Barker, Tom ; Lu, Fu-Hao ; McKenzie, Neil ; Raats, Dina ; Ramirez-Gonzalez, Ricardo H ; Coince, Aurore ; Peel, Ned ; Percival-Alwyn, Lawrence ; Duncan, Owen ; Trösch, Josua ; Yu, Guotai ; Bolser, Dan M ; Namaati, Guy ; Kerhornou, Arnaud ; Spannagl, Manuel ; Gundlach, Heidrun ; Haberer, Georg ; Davey, Robert P ; Fosker, Christine ; Palma, Federica Di ; Phillips, Andrew L ; Millar, A Harvey ; Kersey, Paul J ; Uauy, Cristobal ; Krasileva, Ksenia V ; Swarbreck, David ; Bevan, Michael W ; Clark, Matthew D

Genome research, 2017-05, Vol.27 (5), p.885-896 [Periódico revisado por pares]

United States: Cold Spring Harbor Laboratory Press

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3
A New Reference Genome Assembly for the Microcrustacean Daphnia pulex
A New Reference Genome Assembly for the Microcrustacean Daphnia pulex
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A New Reference Genome Assembly for the Microcrustacean Daphnia pulex

Ye, Zhiqiang ; Xu, Sen ; Spitze, Ken ; Asselman, Jana ; Jiang, Xiaoqian ; Ackerman, Matthew S ; Lopez, Jacqueline ; Harker, Brent ; Raborn, R Taylor ; Thomas, W Kelley ; Ramsdell, Jordan ; Pfrender, Michael E ; Lynch, Michael

G3 : genes - genomes - genetics, 2017-05, Vol.7 (5), p.1405-1416 [Periódico revisado por pares]

United States: Genetics Society of America

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4
Trends in structural coverage of the protein universe and the impact of the Protein Structure Initiative
Trends in structural coverage of the protein universe and the impact of the Protein Structure Initiative
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Trends in structural coverage of the protein universe and the impact of the Protein Structure Initiative

Khafizov, Kamil ; Madrid-Aliste, Carlos ; Almo, Steven C. ; Fiser, Andras

Proceedings of the National Academy of Sciences - PNAS, 2014-03, Vol.111 (10), p.3733-3738 [Periódico revisado por pares]

United States: National Academy of Sciences

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5
Incorporating Gene Annotation into Genomic Prediction of Complex Phenotypes
Incorporating Gene Annotation into Genomic Prediction of Complex Phenotypes
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Incorporating Gene Annotation into Genomic Prediction of Complex Phenotypes

Gao, Ning ; Martini, Johannes W R ; Zhang, Zhe ; Yuan, Xiaolong ; Zhang, Hao ; Simianer, Henner ; Li, Jiaqi

Genetics (Austin), 2017-10, Vol.207 (2), p.489-501 [Periódico revisado por pares]

United States: Genetics Society of America

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6
Automated Update, Revision, and Quality Control of the Maize Genome Annotations Using MAKER-P Improves the B73 RefGen_v3 Gene Models and Identifies New Genes
Automated Update, Revision, and Quality Control of the Maize Genome Annotations Using MAKER-P Improves the B73 RefGen_v3 Gene Models and Identifies New Genes
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Automated Update, Revision, and Quality Control of the Maize Genome Annotations Using MAKER-P Improves the B73 RefGen_v3 Gene Models and Identifies New Genes

Law, MeiYee ; Childs, Kevin L. ; Campbell, Michael S. ; Stein, Joshua C. ; Olson, Andrew J. ; Holt, Carson ; Panchy, Nicholas ; Lei, Jikai ; Jiao, Dian ; Andorf, Carson M. ; Lawrence, Carolyn J. ; Ware, Doreen ; Shiu, Shin-Han ; Sun, Yanni ; Jiang, Ning ; Yandell, Mark

Plant physiology (Bethesda), 2015-01, Vol.167 (1), p.25-39 [Periódico revisado por pares]

United States: American Society of Plant Biologists

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7
SweetSEQer, Simple de Novo Filtering and Annotation of Glycoconjugate Mass Spectra
SweetSEQer, Simple de Novo Filtering and Annotation of Glycoconjugate Mass Spectra
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SweetSEQer, Simple de Novo Filtering and Annotation of Glycoconjugate Mass Spectra

Serang, Oliver ; Froehlich, John W. ; Muntel, Jan ; McDowell, Gary ; Steen, Hanno ; Lee, Richard S. ; Steen, Judith A.

Molecular & cellular proteomics, 2013-06, Vol.12 (6), p.1735-1740 [Periódico revisado por pares]

United States: Elsevier Inc

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8
The InterPro protein families and domains database: 20 years on
The InterPro protein families and domains database: 20 years on
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The InterPro protein families and domains database: 20 years on

Blum, Matthias ; Chang, Hsin-Yu ; Chuguransky, Sara ; Grego, Tiago ; Kandasaamy, Swaathi ; Mitchell, Alex ; Nuka, Gift ; Paysan-Lafosse, Typhaine ; Qureshi, Matloob ; Raj, Shriya ; Richardson, Lorna ; Salazar, Gustavo A ; Williams, Lowri ; Bork, Peer ; Bridge, Alan ; Gough, Julian ; Haft, Daniel H ; Letunic, Ivica ; Marchler-Bauer, Aron ; Mi, Huaiyu ; Natale, Darren A ; Necci, Marco ; Orengo, Christine A ; Pandurangan, Arun P ; Rivoire, Catherine ; Sigrist, Christian J A ; Sillitoe, Ian ; Thanki, Narmada ; Thomas, Paul D ; Tosatto, Silvio C E ; Wu, Cathy H ; Bateman, Alex ; Finn, Robert D

Nucleic acids research, 2021-01, Vol.49 (D1), p.D344-D354 [Periódico revisado por pares]

England: Oxford University Press

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9
DAVID: a web server for functional enrichment analysis and functional annotation of gene lists (2021 update)
DAVID: a web server for functional enrichment analysis and functional annotation of gene lists (2021 update)
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DAVID: a web server for functional enrichment analysis and functional annotation of gene lists (2021 update)

Sherman, Brad T ; Hao, Ming ; Qiu, Ju ; Jiao, Xiaoli ; Baseler, Michael W ; Lane, H Clifford ; Imamichi, Tomozumi ; Chang, Weizhong

Nucleic acids research, 2022-07, Vol.50 (W1), p.W216-W221 [Periódico revisado por pares]

England: Oxford University Press

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10
UniProt: a worldwide hub of protein knowledge
UniProt: a worldwide hub of protein knowledge
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UniProt: a worldwide hub of protein knowledge

Nucleic acids research, 2019-01, Vol.47 (D1), p.D506-D515 [Periódico revisado por pares]

England: Oxford University Press

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