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Microbial defenses against mobile genetic elements and viruses: Who defends whom from what?
Microbial defenses against mobile genetic elements and viruses: Who defends whom from what?
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Microbial defenses against mobile genetic elements and viruses: Who defends whom from what?

Rocha, Eduardo P C ; Bikard, David

PLoS Biology, 2022-01, Vol.20 (1), p.e3001514-e3001514 [Periódico revisado por pares]

United States: Public Library of Science

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2
Diversification of the type IV filament superfamily into machines for adhesion, protein secretion, DNA uptake, and motility
Diversification of the type IV filament superfamily into machines for adhesion, protein secretion, DNA uptake, and motility
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Diversification of the type IV filament superfamily into machines for adhesion, protein secretion, DNA uptake, and motility

Denise, Rémi ; Abby, Sophie S ; Rocha, Eduardo P C Beeby, Morgan

PLoS Biology, 2019-07, Vol.17 (7), p.e3000390-e3000390 [Periódico revisado por pares]

United States: Public Library of Science

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3
CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins
CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins
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CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins

Couvin, David ; Bernheim, Aude ; Toffano-Nioche, Claire ; Touchon, Marie ; Michalik, Juraj ; Néron, Bertrand ; Rocha, Eduardo P C ; Vergnaud, Gilles ; Gautheret, Daniel ; Pourcel, Christine

Nucleic acids research, 2018-07, Vol.46 (W1), p.W246-W251 [Periódico revisado por pares]

England: Oxford University Press

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4
Neutral Theory, Microbial Practice: Challenges in Bacterial Population Genetics
Neutral Theory, Microbial Practice: Challenges in Bacterial Population Genetics
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Neutral Theory, Microbial Practice: Challenges in Bacterial Population Genetics

Rocha, Eduardo P C Kumar, Sudhir

Molecular biology and evolution, 2018-06, Vol.35 (6), p.1338-1347 [Periódico revisado por pares]

United States: Oxford University Press (OUP)

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5
Interplay between the cell envelope and mobile genetic elements shapes gene flow in populations of the nosocomial pathogen Klebsiella pneumoniae
Interplay between the cell envelope and mobile genetic elements shapes gene flow in populations of the nosocomial pathogen Klebsiella pneumoniae
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Interplay between the cell envelope and mobile genetic elements shapes gene flow in populations of the nosocomial pathogen Klebsiella pneumoniae

Haudiquet, Matthieu ; Buffet, Amandine ; Rendueles, Olaya ; Rocha, Eduardo P. C. de Visser, J. Arjan G. M.

PLoS Biology, 2021-07, Vol.19 (7), p.e3001276-e3001276 [Periódico revisado por pares]

San Francisco: Public Library of Science

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6
Integrative and conjugative elements and their hosts: composition, distribution and organization
Integrative and conjugative elements and their hosts: composition, distribution and organization
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Integrative and conjugative elements and their hosts: composition, distribution and organization

Cury, Jean ; Touchon, Marie ; Rocha, Eduardo P C

Nucleic acids research, 2017-09, Vol.45 (15), p.8943-8956 [Periódico revisado por pares]

England: Oxford University Press

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7
A Computational Approach Applied to the Study of Potential Allosteric Inhibitors Protease NS2B/NS3 from Dengue Virus
A Computational Approach Applied to the Study of Potential Allosteric Inhibitors Protease NS2B/NS3 from Dengue Virus
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A Computational Approach Applied to the Study of Potential Allosteric Inhibitors Protease NS2B/NS3 from Dengue Virus

Costa, Renato A. da ; Rocha, João A. P. da ; Pinheiro, Alan S. ; Costa, Andréia do S. S. da ; Rocha, Elaine C. M. da ; Silva, Rai. C. ; Gonçalves, Arlan da S. ; Santos, Cleydson B. R. ; Brasil, Davi do S. B.

Molecules (Basel, Switzerland), 2022-06, Vol.27 (13), p.4118 [Periódico revisado por pares]

Basel: MDPI AG

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8
PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph
PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph
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PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph

Gautreau, Guillaume ; Bazin, Adelme ; Gachet, Mathieu ; Planel, Rémi ; Burlot, Laura ; Dubois, Mathieu ; Perrin, Amandine ; Médigue, Claudine ; Calteau, Alexandra ; Cruveiller, Stéphane ; Matias, Catherine ; Ambroise, Christophe ; Rocha, Eduardo P C ; Vallenet, David Ouzounis, Christos A.

PLoS computational biology, 2020-03, Vol.16 (3), p.e1007732-e1007732 [Periódico revisado por pares]

United States: Public Library of Science

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9
The adaptation of temperate bacteriophages to their host genomes
The adaptation of temperate bacteriophages to their host genomes
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The adaptation of temperate bacteriophages to their host genomes

Bobay, Louis-Marie ; Rocha, Eduardo P C ; Touchon, Marie

Molecular biology and evolution, 2013-04, Vol.30 (4), p.737-751 [Periódico revisado por pares]

United States: Oxford Publishing Limited (England)

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10
The interplay of restriction-modification systems with mobile genetic elements and their prokaryotic hosts
The interplay of restriction-modification systems with mobile genetic elements and their prokaryotic hosts
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The interplay of restriction-modification systems with mobile genetic elements and their prokaryotic hosts

Oliveira, Pedro H ; Touchon, Marie ; Rocha, Eduardo P C

Nucleic acids research, 2014-09, Vol.42 (16), p.10618-10631 [Periódico revisado por pares]

England: Oxford University Press

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