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MacSyFinder: a program to mine genomes for molecular systems with an application to CRISPR-Cas systems
MacSyFinder: a program to mine genomes for molecular systems with an application to CRISPR-Cas systems
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MacSyFinder: a program to mine genomes for molecular systems with an application to CRISPR-Cas systems

Abby, Sophie S ; Néron, Bertrand ; Ménager, Hervé ; Touchon, Marie ; Rocha, Eduardo P C Torres, Néstor V.

PloS one, 2014-10, Vol.9 (10), p.e110726-e110726 [Periódico revisado por pares]

United States: Public Library of Science

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The small, slow and specialized CRISPR and anti-CRISPR of Escherichia and Salmonella
The small, slow and specialized CRISPR and anti-CRISPR of Escherichia and Salmonella
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The small, slow and specialized CRISPR and anti-CRISPR of Escherichia and Salmonella

Touchon, Marie ; Rocha, Eduardo P C Randau, Lennart

PloS one, 2010-06, Vol.5 (6), p.e11126-e11126 [Periódico revisado por pares]

United States: Public Library of Science

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3
Phage-plasmids promote recombination and emergence of phages and plasmids
Phage-plasmids promote recombination and emergence of phages and plasmids
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Phage-plasmids promote recombination and emergence of phages and plasmids

Pfeifer, Eugen ; Rocha, Eduardo P C

Nature communications, 2024-02, Vol.15 (1), p.1545-1545 [Periódico revisado por pares]

England: Nature Publishing Group

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4
Adaptation to novel spatially-structured environments is driven by the capsule and alters virulence-associated traits
Adaptation to novel spatially-structured environments is driven by the capsule and alters virulence-associated traits
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Adaptation to novel spatially-structured environments is driven by the capsule and alters virulence-associated traits

Nucci, Amandine ; Rocha, Eduardo P. C. ; Rendueles, Olaya

Nature communications, 2022-08, Vol.13 (1), p.4751-4751, Article 4751 [Periódico revisado por pares]

London: Nature Publishing Group

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5
Ongoing shuffling of protein fragments diversifies core viral functions linked to interactions with bacterial hosts
Ongoing shuffling of protein fragments diversifies core viral functions linked to interactions with bacterial hosts
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Ongoing shuffling of protein fragments diversifies core viral functions linked to interactions with bacterial hosts

Smug, Bogna J. ; Szczepaniak, Krzysztof ; Rocha, Eduardo P. C. ; Dunin-Horkawicz, Stanislaw ; Mostowy, Rafał J.

Nature communications, 2023-11, Vol.14 (1), p.7460-7460, Article 7460 [Periódico revisado por pares]

London: Nature Publishing Group

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6
Extensive co-binding and rapid redistribution of NANOG and GATA6 during emergence of divergent lineages
Extensive co-binding and rapid redistribution of NANOG and GATA6 during emergence of divergent lineages
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Extensive co-binding and rapid redistribution of NANOG and GATA6 during emergence of divergent lineages

Thompson, Joyce J ; Lee, Daniel J ; Mitra, Apratim ; Frail, Sarah ; Dale, Ryan K ; Rocha, Pedro P

Nature communications, 2022-07, Vol.13 (1), p.4257-4257, Article 4257 [Periódico revisado por pares]

London: Nature Publishing Group

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7
The impact of users’ cognitive function on evaluator perceptions of usability
The impact of users’ cognitive function on evaluator perceptions of usability
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The impact of users’ cognitive function on evaluator perceptions of usability

Martins, Ana Isabel ; Silva, Anabela G ; Pais, Joana ; Cruz, Vítor Tedim ; Rocha, Nelson P

Scientific reports, 2022-08, Vol.12 (1), p.13753-13753, Article 13753 [Periódico revisado por pares]

London: Nature Publishing Group

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8
Pervasive domestication of defective prophages by bacteria
Pervasive domestication of defective prophages by bacteria
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Pervasive domestication of defective prophages by bacteria

Bobay, Louis-Marie ; Touchon, Marie ; Rocha, Eduardo P. C.

Proceedings of the National Academy of Sciences - PNAS, 2014-08, Vol.111 (33), p.12127-12132 [Periódico revisado por pares]

United States: National Academy of Sciences

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9
Rapid evolution of the sequences and gene repertoires of secreted proteins in bacteria
Rapid evolution of the sequences and gene repertoires of secreted proteins in bacteria
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Rapid evolution of the sequences and gene repertoires of secreted proteins in bacteria

Nogueira, Teresa ; Touchon, Marie ; Rocha, Eduardo P C McCutcheon, John

PloS one, 2012-11, Vol.7 (11), p.e49403-e49403 [Periódico revisado por pares]

United States: Public Library of Science

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10
Regulation of genetic flux between bacteria by restriction–modification systems
Regulation of genetic flux between bacteria by restriction–modification systems
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Regulation of genetic flux between bacteria by restriction–modification systems

Oliveira, Pedro H. ; Touchon, Marie ; Rocha, Eduardo P. C.

Proceedings of the National Academy of Sciences - PNAS, 2016-05, Vol.113 (20), p.5658-5663 [Periódico revisado por pares]

United States: National Academy of Sciences

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