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Relating enhancer genetic variation across mammals to complex phenotypes using machine learning
Relating enhancer genetic variation across mammals to complex phenotypes using machine learning
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Relating enhancer genetic variation across mammals to complex phenotypes using machine learning

Kaplow, Irene M ; Lawler, Alyssa J ; Schäffer, Daniel E ; Srinivasan, Chaitanya ; Sestili, Heather H ; Wirthlin, Morgan E ; Phan, BaDoi N ; Prasad, Kavya ; Brown, Ashley ; Zhang, Xiaomeng ; Foley, Kathleen ; Genereux, Diane P ; Zoonomia Consortium ; Karlsson, Elinor K ; Lindblad-Toh, Kerstin ; Meyer, Wynn K ; Pfenning, Andreas R

American Association for the Advancement of Science (AAAS) 2023

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2
The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede strigamia maritima
The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede strigamia maritima
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The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede strigamia maritima

Chipman, Ariel D ; Capella Gutiérrez, Salvador Jesús, 1985 ; Gabaldón Estevan, Juan Antonio, 1973 ; Guigó Serra, Roderic ; Mariotti, Marco, 1984 ; Richards, Stephan

Public Library of Science (PLoS) 2014

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3
Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project
Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project
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Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project

The FAANG Consortium ; Andersson, Leif ; Cedric, Notredame ; Zhou, Huaijun

BioMed Central 2015

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4
The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima
The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima
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The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima

Chipman, Ariel D ; Ferrier, David E K ; Brena, Carlo ; Hughes, Daniel S T ; Schröder, Reinhard ; Torres-Oliva, Montserrat ; Znassi, Nadia ; Jiang, Huaiyang ; Almeida, Francisca C ; Alonso, Claudio R ; Apostolou, Zivkos ; Aqrawi, Peshtewani ; Arthur, Wallace ; Barna, Jennifer C J ; Blankenburg, Kerstin P ; Brites, Daniela ; Capella-Gutiérrez, Salvador ; Coyle, Marcus ; Dearden, Peter K ; Du Pasquier, Louis ; Duncan, Elizabeth J ; Ebert, Dieter ; Eibner, Cornelius ; Erikson, Galina ; Evans, Peter D ; Extavour, Cassandra G ; Francisco, Liezl ; Gabaldón, Toni ; Gillis, William J ; Green, Jack E ; Griffiths-Jones, Sam ; Grimmelikhuijzen, Cornelis J P ; Gubbala, Sai ; Guigó, Roderic ; Han, Yi ; Hauser, Frank ; Havlak, Paul ; Hayden, Luke ; Helbing, Sophie ; Holder, Michael ; Hui, Jerome H L ; Hunn, Julia P ; Hunnekuhl, Vera S ; Jackson, LaRonda ; Javaid, Mehwish ; Jhangiani, Shalini N ; Jiggins, Francis M ; Jones, Tamsin E ; Kenny, Nathan J ; Korchina, Viktoriya ; Kovar, Christie L ; Lapraz, François ; Lee, Sandra L ; Lv, Jie ; Mandapat, Christigale ; Manning, Gerard ; Mariotti, Marco ; Mata, Robert ; Mathew, Tittu ; Neumann, Tobias ; Newsham, Irene ; Ngo, Dinh N ; Ninova, Maria ; Okwuonu, Geoffrey ; Ongeri, Fiona ; Palmer, William J ; Patil, Shobha ; Patraquim, Pedro ; Pham, Christopher ; Pu, Ling-Ling ; Rabouille, Catherine ; Ramos, Olivia Mendivil ; Rhodes, Adelaide C ; Robertson, Helen E ; Robertson, Hugh M ; Ronshaugen, Matthew ; Rozas, Julio ; Saada, Nehad ; Sánchez-Gracia, Alejandro ; Scherer, Steven E ; Schurko, Andrew M ; Siggens, Kenneth W ; Simmons, DeNard ; Stief, Anna ; Stolle, Eckart ; Telford, Maximilian J ; Tessmar-Raible, Kristin ; Thornton, Rebecca ; van der Zee, Maurijn ; von Haeseler, Arndt ; Williams, James M ; Willis, Judith H ; Wu, Yuanqing ; Zou, Xiaoyan ; Lawson, Daniel ; Muzny, Donna M ; Worley, Kim C ; Gibbs, Richard A ; Akam, Michael ; Richards, Stephen Tyler-Smith, Chris

PLoS biology, 2014-11, Vol.12 (11), p.e1002005-e1002005 [Periódico revisado por pares]

United States: Public Library of Science (PLoS)

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5
Genome sequence of the pea aphid Acyrthosiphon pisum
Genome sequence of the pea aphid Acyrthosiphon pisum
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Genome sequence of the pea aphid Acyrthosiphon pisum

Guigó Serra, Roderic ; Richards, Stephan ; Hunter, Wayne ; Cámara, Francisco

Public Library of Science (PLoS) 2010

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6
Prototypical Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima
Prototypical Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima
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Prototypical Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima

Chipman, Ariel D ; Ferrier, David E. K ; Brena, Carlo ; Qu, Jiaxin ; Hughes, Daniel S. T ; Schröder, Reinhard ; Torres-Oliva, Montserrat ; Znassi, Nadia ; Jiang, Huaiyang ; Almeida, Francisca C ; Alonso, Claudio R ; Apostolou, Zivkos ; Aqrawi, Peshtewani ; Arthur, Wallace ; Barna, Jennifer C. J ; Blankenburg, Kerstin P ; Brites, Daniela ; Capella-Gutiérrez, Salvador ; Coyle, Marcus ; Dearden, Peter K ; Pasquier, Louis Du ; Duncan, Elisabeth J ; Ebert, Dieter ; Eibner, Cornelius ; Erikson, Galina ; Evans, Peter D ; Extavour, Cassandra G ; Francisco, Liezl ; Gabaldón, Toni ; Gillis, William J ; Goodwin-Horn, Elisabeth A ; Green, Jack E ; Griffiths-Jones, Sam ; Grimmelikhuijzen, Cornelis J. P ; Gubbala, Sal ; Guigó Serra, Roderic ; Han, Yi ; Hauser, Frank ; Havlak, Paul ; Rozas Liras, Julio A

PLoS biology, 2014-11 [Periódico revisado por pares]

Public Library of Science (PLoS)

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7
Prototypical Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima
Prototypical Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima
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Prototypical Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima

Chipman, Ariel D ; Ferrier, David E. K ; Brena, Carlo ; Qu, Jiaxin ; Hughes, Daniel S. T ; Schröder, Reinhard ; Torres-Oliva, Montserrat ; Znassi, Nadia ; Jiang, Huaiyang ; Almeida, Francisca C ; Alonso, Claudio R ; Apostolou, Zivkos ; Aqrawi, Peshtewani ; Arthur, Wallace ; Barna, Jennifer C. J ; Blankenburg, Kerstin P ; Brites, Daniela ; Capella Gutiérrez, Salvador Jesús, 1985 ; Coyle, Marcus ; Dearden, Peter K ; Pasquier, Louis Du ; Duncan, Elisabeth J ; Ebert, Dieter ; Eibner, Cornelius ; Erikson, Galina ; Evans, Peter D ; Extavour, Cassandra G ; Francisco, Liezl ; Gabaldón, Toni ; Gillis, William J ; Goodwin-Horn, Elisabeth A ; Green, Jack E ; Griffiths-Jones, Sam ; Grimmelikhuijzen, Cornelis J. P ; Gubbala, Sal ; Guigó Serra, Roderic ; Han, Yi ; Hauser, Frank ; Havlak, Paul ; Rozas Liras, Julio A

Public Library of Science (PLoS) 2014-11

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8
An enhanced CRISPR repressor for targeted mammalian gene regulation
An enhanced CRISPR repressor for targeted mammalian gene regulation
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An enhanced CRISPR repressor for targeted mammalian gene regulation

Yeo, Nan Cher ; Chavez, Alejandro ; Lance-Byrne, Alissa ; Chan, Yingleong ; Menn, David ; Milanova, Denitsa ; Kuo, Chih-Chung ; Guo, Xiaoge ; Sharma, Sumana ; Tung, Angela ; Cecchi, Ryan J ; Tuttle, Marcelle ; Pradhan, Swechchha ; Lim, Elaine T ; Davidsohn, Noah ; Ebrahimkhani, Mo R ; Collins, James J ; Lewis, Nathan E ; Kiani, Samira ; Church, George M

Nature methods, 2018-08, Vol.15 (8), p.611-616 [Periódico revisado por pares]

United States: Nature Publishing Group

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9
The non-LTR retrotransposons in Ciona intestinalis: new insights into the evolution of chordate genomes
The non-LTR retrotransposons in Ciona intestinalis: new insights into the evolution of chordate genomes
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The non-LTR retrotransposons in Ciona intestinalis: new insights into the evolution of chordate genomes

Permanyer, Jon ; Gonzàlez-Duarte, Roser ; Albalat, Ricard

Genome biology, 2003-01, Vol.4 (11), p.R73-R73, Article R73 [Periódico revisado por pares]

England: BioMed Central Ltd

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10
The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons
The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons
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The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons

Braasch, Ingo ; Gehrke, Andrew R ; Smith, Jeramiah J ; Kawasaki, Kazuhiko ; Manousaki, Tereza ; Pasquier, Jeremy ; Amores, Angel ; Desvignes, Thomas ; Batzel, Peter ; Catchen, Julian ; Berlin, Aaron M ; Campbell, Michael S ; Barrell, Daniel ; Martin, Kyle J ; Mulley, John F ; Ravi, Vydianathan ; Lee, Alison P ; Nakamura, Tetsuya ; Chalopin, Domitille ; Fan, Shaohua ; Wcisel, Dustin ; Cañestro, Cristian ; Sydes, Jason ; Beaudry, Felix E G ; Sun, Yi ; Hertel, Jana ; Beam, Michael J ; Fasold, Mario ; Ishiyama, Mikio ; Johnson, Jeremy ; Kehr, Steffi ; Lara, Marcia ; Letaw, John H ; Litman, Gary W ; Litman, Ronda T ; Mikami, Masato ; Ota, Tatsuya ; Saha, Nil Ratan ; Williams, Louise ; Stadler, Peter F ; Wang, Han ; Taylor, John S ; Fontenot, Quenton ; Ferrara, Allyse ; Searle, Stephen M J ; Aken, Bronwen ; Yandell, Mark ; Schneider, Igor ; Yoder, Jeffrey A ; Volff, Jean-Nicolas ; Meyer, Axel ; Amemiya, Chris T ; Venkatesh, Byrappa ; Holland, Peter W H ; Guiguen, Yann ; Bobe, Julien ; Shubin, Neil H ; Di Palma, Federica ; Alföldi, Jessica ; Lindblad-Toh, Kerstin ; Postlethwait, John H

Nature genetics, 2016-04, Vol.48 (4), p.427-437 [Periódico revisado por pares]

United States: Nature Publishing Group

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