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1
Cytoscape Automation: empowering workflow-based network analysis
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Cytoscape Automation: empowering workflow-based network analysis

Otasek, David ; Morris, John H ; Bouças, Jorge ; Pico, Alexander R ; Demchak, Barry

Genome Biology, 2019-09, Vol.20 (1), p.185-15, Article 185 [Periódico revisado por pares]

England: BioMed Central Ltd

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2
3D organization of regulatory elements for transcriptional regulation in Arabidopsis
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3D organization of regulatory elements for transcriptional regulation in Arabidopsis

Deng, Li ; Zhou, Qiangwei ; Zhou, Jie ; Zhang, Qing ; Jia, Zhibo ; Zhu, Guangfeng ; Cheng, Sheng ; Cheng, Lulu ; Yin, Caijun ; Yang, Chao ; Shen, Jinxiong ; Nie, Junwei ; Zhu, Jian-Kang ; Li, Guoliang ; Zhao, Lun

Genome Biology, 2023-08, Vol.24 (1), p.181-181, Article 181 [Periódico revisado por pares]

England: BioMed Central Ltd

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3
Mustache: multi-scale detection of chromatin loops from Hi-C and Micro-C maps using scale-space representation
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Mustache: multi-scale detection of chromatin loops from Hi-C and Micro-C maps using scale-space representation

Roayaei Ardakany, Abbas ; Gezer, Halil Tuvan ; Lonardi, Stefano ; Ay, Ferhat

Genome Biology, 2020-09, Vol.21 (1), p.256-256, Article 256 [Periódico revisado por pares]

England: BioMed Central Ltd

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4
The future of intensive care: delirium should no longer be an issue
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The future of intensive care: delirium should no longer be an issue

Kotfis, Katarzyna ; van Diem-Zaal, Irene ; Roberson, Shawniqua Williams ; Sietnicki, Marek ; van den Boogaard, Mark ; Shehabi, Yahya ; Ely, E. Wesley

Critical care (London, England), 2022-07, Vol.26 (1), p.1-200, Article 200 [Periódico revisado por pares]

London: BioMed Central Ltd

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5
Avocado: a multi-scale deep tensor factorization method learns a latent representation of the human epigenome
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Avocado: a multi-scale deep tensor factorization method learns a latent representation of the human epigenome

Schreiber, Jacob ; Durham, Timothy ; Bilmes, Jeffrey ; Noble, William Stafford

Genome Biology, 2020-03, Vol.21 (1), p.81-81, Article 81 [Periódico revisado por pares]

England: BioMed Central Ltd

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6
Clustered CTCF binding is an evolutionary mechanism to maintain topologically associating domains
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Clustered CTCF binding is an evolutionary mechanism to maintain topologically associating domains

Kentepozidou, Elissavet ; Aitken, Sarah J ; Feig, Christine ; Stefflova, Klara ; Ibarra-Soria, Ximena ; Odom, Duncan T ; Roller, Maša ; Flicek, Paul

Genome Biology, 2020-01, Vol.21 (1), p.5-5, Article 5 [Periódico revisado por pares]

England: BioMed Central Ltd

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7
Genomic positional conservation identifies topological anchor point RNAs linked to developmental loci
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Genomic positional conservation identifies topological anchor point RNAs linked to developmental loci

Amaral, Paulo P ; Leonardi, Tommaso ; Han, Namshik ; Viré, Emmanuelle ; Gascoigne, Dennis K ; Arias-Carrasco, Raúl ; Büscher, Magdalena ; Pandolfini, Luca ; Zhang, Anda ; Pluchino, Stefano ; Maracaja-Coutinho, Vinicius ; Nakaya, Helder I ; Hemberg, Martin ; Shiekhattar, Ramin ; Enright, Anton J ; Kouzarides, Tony

Genome Biology, 2018-03, Vol.19 (1), p.32-32, Article 32 [Periódico revisado por pares]

England: BioMed Central Ltd

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8
Analysis methods for studying the 3D architecture of the genome
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Analysis methods for studying the 3D architecture of the genome

Ay, Ferhat ; Noble, William S

Genome Biology, 2015-09, Vol.16 (1), p.183-183, Article 183 [Periódico revisado por pares]

England: BioMed Central Ltd

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9
Identifying significantly impacted pathways: a comprehensive review and assessment
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Identifying significantly impacted pathways: a comprehensive review and assessment

Nguyen, Tuan-Minh ; Shafi, Adib ; Nguyen, Tin ; Draghici, Sorin

Genome Biology, 2019-10, Vol.20 (1), p.203-15, Article 203 [Periódico revisado por pares]

England: BioMed Central Ltd

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10
HOPS: a quantitative score reveals pervasive horizontal pleiotropy in human genetic variation is driven by extreme polygenicity of human traits and diseases
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HOPS: a quantitative score reveals pervasive horizontal pleiotropy in human genetic variation is driven by extreme polygenicity of human traits and diseases

Jordan, Daniel M ; Verbanck, Marie ; Do, Ron

Genome Biology, 2019-10, Vol.20 (1), p.222-222, Article 222 [Periódico revisado por pares]

England: BioMed Central Ltd

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