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1
The small, slow and specialized CRISPR and anti-CRISPR of Escherichia and Salmonella
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The small, slow and specialized CRISPR and anti-CRISPR of Escherichia and Salmonella

Touchon, Marie ; Rocha, Eduardo P C Randau, Lennart

PloS one, 2010-06, Vol.5 (6), p.e11126-e11126 [Periódico revisado por pares]

United States: Public Library of Science

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2
The chromosomal organization of horizontal gene transfer in bacteria
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The chromosomal organization of horizontal gene transfer in bacteria

Oliveira, Pedro H ; Touchon, Marie ; Cury, Jean ; Rocha, Eduardo P C

Nature communications, 2017-10, Vol.8 (1), p.841-11, Article 841 [Periódico revisado por pares]

England: Nature Publishing Group

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3
CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins
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CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins

Couvin, David ; Bernheim, Aude ; Toffano-Nioche, Claire ; Touchon, Marie ; Michalik, Juraj ; Néron, Bertrand ; Rocha, Eduardo P C ; Vergnaud, Gilles ; Gautheret, Daniel ; Pourcel, Christine

Nucleic acids research, 2018-07, Vol.46 (W1), p.W246-W251 [Periódico revisado por pares]

England: Oxford University Press

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4
The repertoire of ICE in prokaryotes underscores the unity, diversity, and ubiquity of conjugation
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The repertoire of ICE in prokaryotes underscores the unity, diversity, and ubiquity of conjugation

Guglielmini, Julien ; Quintais, Leonor ; Garcillán-Barcia, Maria Pilar ; de la Cruz, Fernando ; Rocha, Eduardo P C Casadesús, Josep

PLoS genetics, 2011-08, Vol.7 (8), p.e1002222-e1002222 [Periódico revisado por pares]

United States: Public Library of Science

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5
The systemic imprint of growth and its uses in ecological (meta)genomics
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The systemic imprint of growth and its uses in ecological (meta)genomics

Vieira-Silva, Sara ; Rocha, Eduardo P C Moran, Nancy A.

PLoS genetics, 2010-01, Vol.6 (1), p.e1000808 [Periódico revisado por pares]

United States: Public Library of Science

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6
Identification of multi-loci hubs from 4C-seq demonstrates the functional importance of simultaneous interactions
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Identification of multi-loci hubs from 4C-seq demonstrates the functional importance of simultaneous interactions

Jiang, Tingting ; Raviram, Ramya ; Snetkova, Valentina ; Rocha, Pedro P ; Proudhon, Charlotte ; Badri, Sana ; Bonneau, Richard ; Skok, Jane A ; Kluger, Yuval

Nucleic acids research, 2016-10, Vol.44 (18), p.8714-8725 [Periódico revisado por pares]

England: Oxford University Press

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7
The impact of the neisserial DNA uptake sequences on genome evolution and stability
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The impact of the neisserial DNA uptake sequences on genome evolution and stability

Treangen, Todd J ; Ambur, Ole Herman ; Tonjum, Tone ; Rocha, Eduardo P C

Genome Biology, 2008-01, Vol.9 (3), p.R60-R60 [Periódico revisado por pares]

England: BioMed Central Ltd

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8
Genomic repeats, genome plasticity and the dynamics of Mycoplasma evolution
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Genomic repeats, genome plasticity and the dynamics of Mycoplasma evolution

Rocha, Eduardo P. C. ; Blanchard, Alain

Nucleic acids research, 2002-05, Vol.30 (9), p.2031-2042 [Periódico revisado por pares]

England: Oxford University Press

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9
Identification and analysis of integrons and cassette arrays in bacterial genomes
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Identification and analysis of integrons and cassette arrays in bacterial genomes

Cury, Jean ; Jové, Thomas ; Touchon, Marie ; Néron, Bertrand ; Rocha, Eduardo Pc

Nucleic acids research, 2016-06, Vol.44 (10), p.4539-4550 [Periódico revisado por pares]

England: Oxford University Press

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10
Swelfe: a detector of internal repeats in sequences and structures
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Swelfe: a detector of internal repeats in sequences and structures

Abraham, Anne-Laure ; Rocha, Eduardo P. C. ; Pothier, Joël

Bioinformatics, 2008-07, Vol.24 (13), p.1536-1537 [Periódico revisado por pares]

Oxford: Oxford University Press

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