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Microbial defenses against mobile genetic elements and viruses: Who defends whom from what?
Microbial defenses against mobile genetic elements and viruses: Who defends whom from what?
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Microbial defenses against mobile genetic elements and viruses: Who defends whom from what?

Rocha, Eduardo P C ; Bikard, David

PLoS Biology, 2022-01, Vol.20 (1), p.e3001514-e3001514 [Periódico revisado por pares]

United States: Public Library of Science

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The small, slow and specialized CRISPR and anti-CRISPR of Escherichia and Salmonella
The small, slow and specialized CRISPR and anti-CRISPR of Escherichia and Salmonella
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The small, slow and specialized CRISPR and anti-CRISPR of Escherichia and Salmonella

Touchon, Marie ; Rocha, Eduardo P C Randau, Lennart

PloS one, 2010-06, Vol.5 (6), p.e11126-e11126 [Periódico revisado por pares]

United States: Public Library of Science

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3
Diversification of the type IV filament superfamily into machines for adhesion, protein secretion, DNA uptake, and motility
Diversification of the type IV filament superfamily into machines for adhesion, protein secretion, DNA uptake, and motility
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Diversification of the type IV filament superfamily into machines for adhesion, protein secretion, DNA uptake, and motility

Denise, Rémi ; Abby, Sophie S ; Rocha, Eduardo P C Beeby, Morgan

PLoS Biology, 2019-07, Vol.17 (7), p.e3000390-e3000390 [Periódico revisado por pares]

United States: Public Library of Science

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4
Pathways for horizontal gene transfer in bacteria revealed by a global map of their plasmids
Pathways for horizontal gene transfer in bacteria revealed by a global map of their plasmids
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Pathways for horizontal gene transfer in bacteria revealed by a global map of their plasmids

Redondo-Salvo, Santiago ; Fernández-López, Raúl ; Ruiz, Raúl ; Vielva, Luis ; de Toro, María ; Rocha, Eduardo P. C. ; Garcillán-Barcia, M. Pilar ; de la Cruz, Fernando

Nature communications, 2020-07, Vol.11 (1), p.3602-3602, Article 3602 [Periódico revisado por pares]

London: Nature Publishing Group

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5
Horizontal transfer, not duplication, drives the expansion of protein families in prokaryotes
Horizontal transfer, not duplication, drives the expansion of protein families in prokaryotes
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Horizontal transfer, not duplication, drives the expansion of protein families in prokaryotes

Treangen, Todd J ; Rocha, Eduardo P C Moran, Nancy A.

PLoS genetics, 2011-01, Vol.7 (1), p.e1001284 [Periódico revisado por pares]

United States: Public Library of Science

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6
The chromosomal organization of horizontal gene transfer in bacteria
The chromosomal organization of horizontal gene transfer in bacteria
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The chromosomal organization of horizontal gene transfer in bacteria

Oliveira, Pedro H ; Touchon, Marie ; Cury, Jean ; Rocha, Eduardo P C

Nature communications, 2017-10, Vol.8 (1), p.841-11, Article 841 [Periódico revisado por pares]

England: Nature Publishing Group

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7
The non-flagellar type III secretion system evolved from the bacterial flagellum and diversified into host-cell adapted systems
The non-flagellar type III secretion system evolved from the bacterial flagellum and diversified into host-cell adapted systems
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The non-flagellar type III secretion system evolved from the bacterial flagellum and diversified into host-cell adapted systems

Abby, Sophie S ; Rocha, Eduardo P C Achtman, Mark

PLoS genetics, 2012-09, Vol.8 (9), p.e1002983-e1002983 [Periódico revisado por pares]

United States: Public Library of Science

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8
CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins
CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins
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CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins

Couvin, David ; Bernheim, Aude ; Toffano-Nioche, Claire ; Touchon, Marie ; Michalik, Juraj ; Néron, Bertrand ; Rocha, Eduardo P C ; Vergnaud, Gilles ; Gautheret, Daniel ; Pourcel, Christine

Nucleic acids research, 2018-07, Vol.46 (W1), p.W246-W251 [Periódico revisado por pares]

England: Oxford University Press

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9
Human commensal gut Proteobacteria withstand type VI secretion attacks through immunity protein-independent mechanisms
Human commensal gut Proteobacteria withstand type VI secretion attacks through immunity protein-independent mechanisms
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Human commensal gut Proteobacteria withstand type VI secretion attacks through immunity protein-independent mechanisms

Flaugnatti, Nicolas ; Isaac, Sandrine ; Lemos Rocha, Leonardo F. ; Stutzmann, Sandrine ; Rendueles, Olaya ; Stoudmann, Candice ; Vesel, Nina ; Garcia-Garcera, Marc ; Buffet, Amandine ; Sana, Thibault G. ; Rocha, Eduardo P. C. ; Blokesch, Melanie

Nature communications, 2021-10, Vol.12 (1), p.5751-5751, Article 5751 [Periódico revisado por pares]

London: Nature Publishing Group

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10
MacSyFinder: a program to mine genomes for molecular systems with an application to CRISPR-Cas systems
MacSyFinder: a program to mine genomes for molecular systems with an application to CRISPR-Cas systems
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MacSyFinder: a program to mine genomes for molecular systems with an application to CRISPR-Cas systems

Abby, Sophie S ; Néron, Bertrand ; Ménager, Hervé ; Touchon, Marie ; Rocha, Eduardo P C Torres, Néstor V.

PloS one, 2014-10, Vol.9 (10), p.e110726-e110726 [Periódico revisado por pares]

United States: Public Library of Science

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