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Highly accurate long reads are crucial for realizing the potential of biodiversity genomics
Highly accurate long reads are crucial for realizing the potential of biodiversity genomics
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Highly accurate long reads are crucial for realizing the potential of biodiversity genomics

Hotaling, Scott ; Wilcox, Edward R ; Heckenhauer, Jacqueline ; Stewart, Russell J ; Frandsen, Paul B

BMC genomics, 2023-03, Vol.24 (1), p.117-117, Article 117 [Periódico revisado por pares]

England: BioMed Central Ltd

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12
Differential expression analysis for sequence count data
Differential expression analysis for sequence count data
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Differential expression analysis for sequence count data

Anders, Simon ; Huber, Wolfgang

Genome biology, 2010-10, Vol.11 (10), p.R106-R106, Article R106 [Periódico revisado por pares]

England: BioMed Central Ltd

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13
HiFiAdapterFilt, a memory efficient read processing pipeline, prevents occurrence of adapter sequence in PacBio HiFi reads and their negative impacts on genome assembly
HiFiAdapterFilt, a memory efficient read processing pipeline, prevents occurrence of adapter sequence in PacBio HiFi reads and their negative impacts on genome assembly
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HiFiAdapterFilt, a memory efficient read processing pipeline, prevents occurrence of adapter sequence in PacBio HiFi reads and their negative impacts on genome assembly

Sim, Sheina B ; Corpuz, Renee L ; Simmonds, Tyler J ; Geib, Scott M

BMC genomics, 2022-02, Vol.23 (1), p.157-157, Article 157 [Periódico revisado por pares]

England: BioMed Central Ltd

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14
Optimized pipeline of MuTect and GATK tools to improve the detection of somatic single nucleotide polymorphisms in whole-exome sequencing data
Optimized pipeline of MuTect and GATK tools to improve the detection of somatic single nucleotide polymorphisms in whole-exome sequencing data
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Optimized pipeline of MuTect and GATK tools to improve the detection of somatic single nucleotide polymorphisms in whole-exome sequencing data

do Valle, Ítalo Faria ; Giampieri, Enrico ; Simonetti, Giorgia ; Padella, Antonella ; Manfrini, Marco ; Ferrari, Anna ; Papayannidis, Cristina ; Zironi, Isabella ; Garonzi, Marianna ; Bernardi, Simona ; Delledonne, Massimo ; Martinelli, Giovanni ; Remondini, Daniel ; Castellani, Gastone

BMC bioinformatics, 2016-11, Vol.17 (Suppl 12), p.341-341, Article 341 [Periódico revisado por pares]

England: BioMed Central Ltd

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15
Plastid: nucleotide-resolution analysis of next-generation sequencing and genomics data
Plastid: nucleotide-resolution analysis of next-generation sequencing and genomics data
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Plastid: nucleotide-resolution analysis of next-generation sequencing and genomics data

Dunn, Joshua G ; Weissman, Jonathan S

BMC genomics, 2016-11, Vol.17 (1), p.958-958, Article 958 [Periódico revisado por pares]

England: BioMed Central Ltd

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16
ngs.plot: Quick mining and visualization of next-generation sequencing data by integrating genomic databases
ngs.plot: Quick mining and visualization of next-generation sequencing data by integrating genomic databases
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ngs.plot: Quick mining and visualization of next-generation sequencing data by integrating genomic databases

Shen, Li ; Shao, Ningyi ; Liu, Xiaochuan ; Nestler, Eric

BMC genomics, 2014-04, Vol.15 (1), p.284-284 [Periódico revisado por pares]

England: BioMed Central Ltd

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17
Comparison of three next-generation sequencing platforms for metagenomic sequencing and identification of pathogens in blood
Comparison of three next-generation sequencing platforms for metagenomic sequencing and identification of pathogens in blood
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Comparison of three next-generation sequencing platforms for metagenomic sequencing and identification of pathogens in blood

Frey, Kenneth G ; Herrera-Galeano, Jesus Enrique ; Redden, Cassie L ; Luu, Truong V ; Servetas, Stephanie L ; Mateczun, Alfred J ; Mokashi, Vishwesh P ; Bishop-Lilly, Kimberly A

BMC genomics, 2014-02, Vol.15 (1), p.96-96, Article 96 [Periódico revisado por pares]

England: BioMed Central Ltd

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18
systemPipeR: NGS workflow and report generation environment
systemPipeR: NGS workflow and report generation environment
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systemPipeR: NGS workflow and report generation environment

H Backman, Tyler W ; Girke, Thomas

BMC bioinformatics, 2016-09, Vol.17 (1), p.388-388, Article 388 [Periódico revisado por pares]

England: BioMed Central Ltd

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19
Transcriptome analysis of heat stress and drought stress in pearl millet based on Pacbio full-length transcriptome sequencing
Transcriptome analysis of heat stress and drought stress in pearl millet based on Pacbio full-length transcriptome sequencing
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Transcriptome analysis of heat stress and drought stress in pearl millet based on Pacbio full-length transcriptome sequencing

Sun, Min ; Huang, Dejun ; Zhang, Ailing ; Khan, Imran ; Yan, Haidong ; Wang, Xiaoshan ; Zhang, Xinquan ; Zhang, Jian ; Huang, Linkai

BMC plant biology, 2020-07, Vol.20 (1), p.323-323, Article 323 [Periódico revisado por pares]

England: BioMed Central Ltd

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20
Identification and correction of systematic error in high-throughput sequence data
Identification and correction of systematic error in high-throughput sequence data
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Identification and correction of systematic error in high-throughput sequence data

Meacham, Frazer ; Boffelli, Dario ; Dhahbi, Joseph ; Martin, David I K ; Singer, Meromit ; Pachter, Lior

BMC bioinformatics, 2011-11, Vol.12 (1), p.451-451, Article 451 [Periódico revisado por pares]

England: BioMed Central Ltd

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