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1
Robust hierarchical density estimation and regression for re-stained histological whole slide image co-registration
Robust hierarchical density estimation and regression for re-stained histological whole slide image co-registration
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Robust hierarchical density estimation and regression for re-stained histological whole slide image co-registration

Jiang, Jun ; Larson, Nicholas B ; Prodduturi, Naresh ; Flotte, Thomas J ; Hart, Steven N Sarder, Pinaki

PloS one, 2019-07, Vol.14 (7), p.e0220074-e0220074 [Periódico revisado por pares]

United States: Public Library of Science

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2
Recommendations for performance optimizations when using GATK3.8 and GATK4
Recommendations for performance optimizations when using GATK3.8 and GATK4
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Recommendations for performance optimizations when using GATK3.8 and GATK4

Heldenbrand, Jacob R ; Baheti, Saurabh ; Bockol, Matthew A ; Drucker, Travis M ; Hart, Steven N ; Hudson, Matthew E ; Iyer, Ravishankar K ; Kalmbach, Michael T ; Kendig, Katherine I ; Klee, Eric W ; Mattson, Nathan R ; Wieben, Eric D ; Wiepert, Mathieu ; Wildman, Derek E ; Mainzer, Liudmila S

BMC bioinformatics, 2019-11, Vol.20 (1), p.557-557, Article 557 [Periódico revisado por pares]

England: BioMed Central Ltd

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3
SoftSearch: integration of multiple sequence features to identify breakpoints of structural variations
SoftSearch: integration of multiple sequence features to identify breakpoints of structural variations
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SoftSearch: integration of multiple sequence features to identify breakpoints of structural variations

Hart, Steven N ; Sarangi, Vivekananda ; Moore, Raymond ; Baheti, Saurabh ; Bhavsar, Jaysheel D ; Couch, Fergus J ; Kocher, Jean-Pierre A Tang, Haixu

PloS one, 2013-12, Vol.8 (12), p.e83356-e83356 [Periódico revisado por pares]

United States: Public Library of Science

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4
Mutational Landscapes of Sequential Prostate Metastases and Matched Patient Derived Xenografts during Enzalutamide Therapy
Mutational Landscapes of Sequential Prostate Metastases and Matched Patient Derived Xenografts during Enzalutamide Therapy
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Mutational Landscapes of Sequential Prostate Metastases and Matched Patient Derived Xenografts during Enzalutamide Therapy

Kohli, Manish ; Wang, Liguo ; Xie, Fang ; Sicotte, Hugues ; Yin, Ping ; Dehm, Scott M ; Hart, Steven N ; Vedell, Peter T ; Barman, Poulami ; Qin, Rui ; Mahoney, Douglas W ; Carlson, Rachel E ; Eckel-Passow, Jeanette E ; Atwell, Thomas D ; Eiken, Patrick W ; McMenomy, Brendan P ; Wieben, Eric D ; Jha, Gautam ; Jimenez, Rafael E ; Weinshilboum, Richard ; Wang, Liewei Kyprianou, Natasha

PloS one, 2015-12, Vol.10 (12), p.e0145176 [Periódico revisado por pares]

United States: Public Library of Science

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5
Correction to: Recommendations for performance optimizations when using GATK3.8 and GATK4
Correction to: Recommendations for performance optimizations when using GATK3.8 and GATK4
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Correction to: Recommendations for performance optimizations when using GATK3.8 and GATK4

Heldenbrand, Jacob R ; Baheti, Saurabh ; Bockol, Matthew A ; Drucker, Travis M ; Hart, Steven N ; Hudson, Matthew E ; Iyer, Ravishankar K ; Kalmbach, Michael T ; Kendig, Katherine I ; Klee, Eric W ; Mattson, Nathan R ; Wieben, Eric D ; Wiepert, Mathieu ; Wildman, Derek E ; Mainzer, Liudmila S

BMC bioinformatics, 2019-12, Vol.20 (1), p.722-722, Article 722 [Periódico revisado por pares]

England: BioMed Central Ltd

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6
From days to hours: reporting clinically actionable variants from whole genome sequencing
From days to hours: reporting clinically actionable variants from whole genome sequencing
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From days to hours: reporting clinically actionable variants from whole genome sequencing

Middha, Sumit ; Baheti, Saurabh ; Hart, Steven N ; Kocher, Jean-Pierre A Chiu, Charles Y.

PloS one, 2014-02, Vol.9 (2), p.e86803-e86803 [Periódico revisado por pares]

United States: Public Library of Science

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7
Transcriptomic and Immunohistochemical Profiling of SLC6A14 in Pancreatic Ductal Adenocarcinoma
Transcriptomic and Immunohistochemical Profiling of SLC6A14 in Pancreatic Ductal Adenocarcinoma
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Transcriptomic and Immunohistochemical Profiling of SLC6A14 in Pancreatic Ductal Adenocarcinoma

Wuertz, Ryan E. ; Couch, Fergus J. ; Vasmatzis, George ; Bender, Claire E. ; Carlson, Stephanie K. ; Bamlet, William R. ; O’Brien, Daniel R. ; Rakhshan Rohakhtar, Fariborz ; Felipe Lima, Joema ; Hart, Steven N. ; Murphy, Stephen J. ; Erdogan, Sibel ; Penheiter, Alan R. ; Smyrk, Thomas C. Picardi, Ernesto

BioMed research international, 2015-01, Vol.2015 (2015), p.1-10 [Periódico revisado por pares]

Cairo, Egypt: Hindawi Publishing Corporation

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8
Democratizing Artificial Intelligence in Anatomic Pathology
Democratizing Artificial Intelligence in Anatomic Pathology
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Democratizing Artificial Intelligence in Anatomic Pathology

Flotte, Thomas J ; Derauf, Stephanie A ; Byrd, Rachel K ; Kroneman, Trynda N ; Bell, Debra A ; Stetzik, Lucas ; Lee, Seung-Yi ; Samiei, Alireza ; Hart, Steven N ; Garcia, Joaquin J ; Beamer, Gillian ; Westerling-Bui, Thomas

Archives of pathology & laboratory medicine (1976), 2024-04 [Periódico revisado por pares]

United States

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9
VCF-Miner: GUI-based application for mining variants and annotations stored in VCF files
VCF-Miner: GUI-based application for mining variants and annotations stored in VCF files
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VCF-Miner: GUI-based application for mining variants and annotations stored in VCF files

Hart, Steven N ; Duffy, Patrick ; Quest, Daniel J ; Hossain, Asif ; Meiners, Mike A ; Kocher, Jean-Pierre

Briefings in bioinformatics, 2016-03, Vol.17 (2), p.346-351 [Periódico revisado por pares]

England: Oxford Publishing Limited (England)

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10
Microarray analysis of the in vivo sequence preferences of a minor groove binding drug
Microarray analysis of the in vivo sequence preferences of a minor groove binding drug
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Microarray analysis of the in vivo sequence preferences of a minor groove binding drug

Eckdahl, Todd T ; Brown, Adam D ; Hart, Steven N ; Malloy, Kelly J ; Shott, Martha ; Yiu, Gloria ; Hoopes, Laura L Mays ; Heyer, Laurie J

BMC genomics, 2008-01, Vol.9 (1), p.32-32 [Periódico revisado por pares]

England: BioMed Central Ltd

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