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LOSITAN: a workbench to detect molecular adaptation based on a Fst-outlier method
LOSITAN: a workbench to detect molecular adaptation based on a Fst-outlier method
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LOSITAN: a workbench to detect molecular adaptation based on a Fst-outlier method

Antao, Tiago ; Lopes, Ana ; Lopes, Ricardo J ; Beja-Pereira, Albano ; Luikart, Gordon

BMC bioinformatics, 2008-07, Vol.9 (1), p.323-323 [Peer Reviewed Journal]

England: BioMed Central Ltd

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2
Integrating Transcriptomic and Proteomic Data Using Predictive Regulatory Network Models of Host Response to Pathogens
Integrating Transcriptomic and Proteomic Data Using Predictive Regulatory Network Models of Host Response to Pathogens
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Integrating Transcriptomic and Proteomic Data Using Predictive Regulatory Network Models of Host Response to Pathogens

Chasman, Deborah ; Walters, Kevin B ; Lopes, Tiago J S ; Eisfeld, Amie J ; Kawaoka, Yoshihiro ; Roy, Sushmita Leslie, Christina S.

PLoS computational biology, 2016-07, Vol.12 (7), p.e1005013-e1005013 [Peer Reviewed Journal]

United States: Public Library of Science

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3
Tasting to preserve: An educational activity to promote children's positive attitudes towards intraspecific diversity conservation
Tasting to preserve: An educational activity to promote children's positive attitudes towards intraspecific diversity conservation
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Tasting to preserve: An educational activity to promote children's positive attitudes towards intraspecific diversity conservation

Pessoa, Patrícia ; Aboim, Sara ; Afonso, Lisa ; Lopes, J Bernardino ; Sá-Pinto, Xana Pal, Biswajit

PloS one, 2024-01, Vol.19 (1), p.e0285649-e0285649 [Peer Reviewed Journal]

United States: Public Library of Science

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4
Adding protein context to the human protein-protein interaction network to reveal meaningful interactions
Adding protein context to the human protein-protein interaction network to reveal meaningful interactions
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Adding protein context to the human protein-protein interaction network to reveal meaningful interactions

Schaefer, Martin H ; Lopes, Tiago J S ; Mah, Nancy ; Shoemaker, Jason E ; Matsuoka, Yukiko ; Fontaine, Jean-Fred ; Louis-Jeune, Caroline ; Eisfeld, Amie J ; Neumann, Gabriele ; Perez-Iratxeta, Carol ; Kawaoka, Yoshihiro ; Kitano, Hiroaki ; Andrade-Navarro, Miguel A Rzhetsky, Andrey

PLoS computational biology, 2013-01, Vol.9 (1), p.e1002860-e1002860 [Peer Reviewed Journal]

United States: Public Library of Science

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5
CTen: a web-based platform for identifying enriched cell types from heterogeneous microarray data
CTen: a web-based platform for identifying enriched cell types from heterogeneous microarray data
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CTen: a web-based platform for identifying enriched cell types from heterogeneous microarray data

Shoemaker, Jason E ; Lopes, Tiago J S ; Ghosh, Samik ; Matsuoka, Yukiko ; Kawaoka, Yoshihiro ; Kitano, Hiroaki

BMC genomics, 2012-09, Vol.13 (1), p.460-460 [Peer Reviewed Journal]

England: BioMed Central Ltd

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6
Tumor microenvironment conditions alter Akt and Na + /H + exchanger NHE1 expression in endothelial cells more than hypoxia alone: implications for endothelial cell function in cancer
Tumor microenvironment conditions alter Akt and Na + /H + exchanger NHE1 expression in endothelial cells more than hypoxia alone: implications for endothelial cell function in cancer
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Tumor microenvironment conditions alter Akt and Na + /H + exchanger NHE1 expression in endothelial cells more than hypoxia alone: implications for endothelial cell function in cancer

Pedersen, A K ; Mendes Lopes de Melo, J ; Mørup, N ; Tritsaris, K ; Pedersen, S F

BMC cancer, 2017-08, Vol.17 (1), p.542-542, Article 542 [Peer Reviewed Journal]

England: BioMed Central Ltd

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7
Molecular parallelisms between pigmentation in the avian iris and the integument of ectothermic vertebrates
Molecular parallelisms between pigmentation in the avian iris and the integument of ectothermic vertebrates
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Molecular parallelisms between pigmentation in the avian iris and the integument of ectothermic vertebrates

Andrade, Pedro ; Gazda, Małgorzata A ; Araújo, Pedro M ; Afonso, Sandra ; Rasmussen, Jacob A ; Marques, Cristiana I ; Lopes, Ricardo J ; Gilbert, M Thomas P ; Carneiro, Miguel Dyer, Kelly A.

PLoS genetics, 2021-02, Vol.17 (2), p.e1009404 [Peer Reviewed Journal]

United States: Public Library of Science

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8
Explainable machine learning methods and respiratory oscillometry for the diagnosis of respiratory abnormalities in sarcoidosis
Explainable machine learning methods and respiratory oscillometry for the diagnosis of respiratory abnormalities in sarcoidosis
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Explainable machine learning methods and respiratory oscillometry for the diagnosis of respiratory abnormalities in sarcoidosis

de Lima, Allan Danilo ; Lopes, Agnaldo J ; do Amaral, Jorge Luis Machado ; de Melo, Pedro Lopes

BMC medical informatics and decision making, 2022-10, Vol.22 (1), p.1-274, Article 274 [Peer Reviewed Journal]

London: BioMed Central Ltd

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9
RNA-Seq reveals different responses to drought in Neotropical trees from savannas and seasonally dry forests
RNA-Seq reveals different responses to drought in Neotropical trees from savannas and seasonally dry forests
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RNA-Seq reveals different responses to drought in Neotropical trees from savannas and seasonally dry forests

Sobreiro, Mariane B ; Collevatti, Rosane G ; Dos Santos, Yuri L A ; Bandeira, Ludmila F ; Lopes, Francis J F ; Novaes, Evandro

BMC plant biology, 2021-10, Vol.21 (1), p.463-463, Article 463 [Peer Reviewed Journal]

England: BioMed Central Ltd

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10
A reaction-diffusion network model predicts a dual role of Cactus/IκB to regulate Dorsal/NFκB nuclear translocation in Drosophila
A reaction-diffusion network model predicts a dual role of Cactus/IκB to regulate Dorsal/NFκB nuclear translocation in Drosophila
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A reaction-diffusion network model predicts a dual role of Cactus/IκB to regulate Dorsal/NFκB nuclear translocation in Drosophila

Barros, Claudio D. T. ; Cardoso, Maira A. ; Bisch, Paulo M. ; Araujo, Helena M. ; Lopes, Francisco J. P. Umulis, David

PLoS computational biology, 2021-05, Vol.17 (5), p.e1009040-e1009040 [Peer Reviewed Journal]

San Francisco: Public Library of Science

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