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The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement setsSzklarczyk, Damian ; Gable, Annika L ; Nastou, Katerina C ; Lyon, David ; Kirsch, Rebecca ; Pyysalo, Sampo ; Doncheva, Nadezhda T ; Legeay, Marc ; Fang, Tao ; Bork, Peer ; Jensen, Lars J ; von Mering, ChristianNucleic acids research, 2021-01, Vol.49 (D1), p.D605-D612 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Interactive Tree Of Life (iTOL) v4: recent updates and new developmentsLetunic, Ivica ; Bork, PeerNucleic acids research, 2019-07, Vol.47 (W1), p.W256-W259 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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WebGestalt 2019: gene set analysis toolkit with revamped UIs and APIsLiao, Yuxing ; Wang, Jing ; Jaehnig, Eric J ; Shi, Zhiao ; Zhang, BingNucleic acids research, 2019-07, Vol.47 (W1), p.W199-W205 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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WikiPathways: connecting communitiesMartens, Marvin ; Ammar, Ammar ; Riutta, Anders ; Waagmeester, Andra ; Slenter, Denise N ; Hanspers, Kristina ; A. Miller, Ryan ; Digles, Daniela ; Lopes, Elisson N ; Ehrhart, Friederike ; Dupuis, Lauren J ; Winckers, Laurent A ; Coort, Susan L ; Willighagen, Egon L ; Evelo, Chris T ; Pico, Alexander R ; Kutmon, MartinaNucleic acids research, 2021-01, Vol.49 (D1), p.D613-D621 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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The Reactome Pathway KnowledgebaseFabregat, Antonio ; Jupe, Steven ; Matthews, Lisa ; Sidiropoulos, Konstantinos ; Gillespie, Marc ; Garapati, Phani ; Haw, Robin ; Jassal, Bijay ; Korninger, Florian ; May, Bruce ; Milacic, Marija ; Roca, Corina Duenas ; Rothfels, Karen ; Sevilla, Cristoffer ; Shamovsky, Veronica ; Shorser, Solomon ; Varusai, Thawfeek ; Viteri, Guilherme ; Weiser, Joel ; Wu, Guanming ; Stein, Lincoln ; Hermjakob, Henning ; D'Eustachio, PeterNucleic acids research, 2018-01, Vol.46 (D1), p.D649-D655 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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The STRING database in 2023: protein-protein association networks and functional enrichment analyses for any sequenced genome of interestSzklarczyk, Damian ; Kirsch, Rebecca ; Koutrouli, Mikaela ; Nastou, Katerina ; Mehryary, Farrokh ; Hachilif, Radja ; Gable, Annika L ; Fang, Tao ; Doncheva, Nadezhda T ; Pyysalo, Sampo ; Bork, Peer ; Jensen, Lars J ; von Mering, ChristianNucleic acids research, 2023-01, Vol.51 (D1), p.D638-D646 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easyLetunic, Ivica ; Bork, PeerNucleic acids research, 2011-07, Vol.39 (suppl_2), p.W475-W478 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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HMDB 5.0: the Human Metabolome Database for 2022Wishart, David S ; Guo, AnChi ; Oler, Eponine ; Wang, Fei ; Anjum, Afia ; Peters, Harrison ; Dizon, Raynard ; Sayeeda, Zinat ; Tian, Siyang ; Lee, Brian L ; Berjanskii, Mark ; Mah, Robert ; Yamamoto, Mai ; Jovel, Juan ; Torres-Calzada, Claudia ; Hiebert-Giesbrecht, Mickel ; Lui, Vicki W ; Varshavi, Dorna ; Varshavi, Dorsa ; Allen, Dana ; Arndt, David ; Khetarpal, Nitya ; Sivakumaran, Aadhavya ; Harford, Karxena ; Sanford, Selena ; Yee, Kristen ; Cao, Xuan ; Budinski, Zachary ; Liigand, Jaanus ; Zhang, Lun ; Zheng, Jiamin ; Mandal, Rupasri ; Karu, Naama ; Dambrova, Maija ; Schiöth, Helgi B ; Greiner, Russell ; Gautam, VasukNucleic acids research, 2022-01, Vol.50 (D1), p.D622-D631 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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Tree Visualization By One Table (tvBOT): a web application for visualizing, modifying and annotating phylogenetic treesXie, Jianmin ; Chen, Yuerong ; Cai, Guanjing ; Cai, Runlin ; Hu, Zhong ; Wang, HuiNucleic acids research, 2023-07, Vol.51 (W1), p.W587-W592 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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EcoCyc: a comprehensive database of Escherichia coli biologyKeseler, Ingrid M ; Collado-Vides, Julio ; Santos-Zavaleta, Alberto ; Peralta-Gil, Martin ; Gama-Castro, Socorro ; Muñiz-Rascado, Luis ; Bonavides-Martinez, César ; Paley, Suzanne ; Krummenacker, Markus ; Altman, Tomer ; Kaipa, Pallavi ; Spaulding, Aaron ; Pacheco, John ; Latendresse, Mario ; Fulcher, Carol ; Sarker, Malabika ; Shearer, Alexander G ; Mackie, Amanda ; Paulsen, Ian ; Gunsalus, Robert P ; Karp, Peter DNucleic acids research, 2011-01, Vol.39 (Database issue), p.D583-D590 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |