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Refinado por: Base de dados/Biblioteca: DOAJ Directory of Open Access Journals remover assunto: Science & Technology remover Life Sciences & Biomedicine remover
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BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
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BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis

Bouckaert, Remco ; Vaughan, Timothy G ; Barido-Sottani, Joëlle ; Duchêne, Sebastián ; Fourment, Mathieu ; Gavryushkina, Alexandra ; Heled, Joseph ; Jones, Graham ; Kühnert, Denise ; De Maio, Nicola ; Matschiner, Michael ; Mendes, Fábio K ; Müller, Nicola F ; Ogilvie, Huw A ; du Plessis, Louis ; Popinga, Alex ; Rambaut, Andrew ; Rasmussen, David ; Siveroni, Igor ; Suchard, Marc A ; Wu, Chieh-Hsi ; Xie, Dong ; Zhang, Chi ; Stadler, Tanja ; Drummond, Alexei J Pertea, Mihaela

PLoS computational biology, 2019-04, Vol.15 (4), p.e1006650-e1006650 [Periódico revisado por pares]

United States: Public Library of Science

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2
Better together: Elements of successful scientific software development in a distributed collaborative community
Better together: Elements of successful scientific software development in a distributed collaborative community
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Better together: Elements of successful scientific software development in a distributed collaborative community

Koehler Leman, Julia ; Weitzner, Brian D ; Renfrew, P Douglas ; Lewis, Steven M ; Moretti, Rocco ; Watkins, Andrew M ; Mulligan, Vikram Khipple ; Lyskov, Sergey ; Adolf-Bryfogle, Jared ; Labonte, Jason W ; Krys, Justyna ; Bystroff, Christopher ; Schief, William ; Gront, Dominik ; Schueler-Furman, Ora ; Baker, David ; Bradley, Philip ; Dunbrack, Roland ; Kortemme, Tanja ; Leaver-Fay, Andrew ; Strauss, Charlie E M ; Meiler, Jens ; Kuhlman, Brian ; Gray, Jeffrey J ; Bonneau, Richard Schneidman-Duhovny, Dina

PLoS computational biology, 2020-05, Vol.16 (5), p.e1007507-e1007507 [Periódico revisado por pares]

United States: Public Library of Science

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3
A spectrum of free software tools for processing the VCF variant call format: vcflib, bio-vcf, cyvcf2, hts-nim and slivar
A spectrum of free software tools for processing the VCF variant call format: vcflib, bio-vcf, cyvcf2, hts-nim and slivar
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A spectrum of free software tools for processing the VCF variant call format: vcflib, bio-vcf, cyvcf2, hts-nim and slivar

Garrison, Erik ; Kronenberg, Zev N ; Dawson, Eric T ; Pedersen, Brent S ; Prins, Pjotr Schneidman-Duhovny, Dina

PLoS computational biology, 2022-05, Vol.18 (5), p.e1009123-e1009123 [Periódico revisado por pares]

United States: Public Library of Science

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4
A fuzzy TOPSIS based analysis toward selection of effective security requirements engineering approach for trustworthy healthcare software development
A fuzzy TOPSIS based analysis toward selection of effective security requirements engineering approach for trustworthy healthcare software development
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A fuzzy TOPSIS based analysis toward selection of effective security requirements engineering approach for trustworthy healthcare software development

Ansari, Md Tarique Jamal ; Al-Zahrani, Fahad Ahmed ; Pandey, Dhirendra ; Agrawal, Alka

BMC medical informatics and decision making, 2020-09, Vol.20 (1), p.236-236, Article 236 [Periódico revisado por pares]

England: BioMed Central Ltd

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5
HH-suite3 for fast remote homology detection and deep protein annotation
HH-suite3 for fast remote homology detection and deep protein annotation
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HH-suite3 for fast remote homology detection and deep protein annotation

Steinegger, Martin ; Meier, Markus ; Mirdita, Milot ; Vöhringer, Harald ; Haunsberger, Stephan J. ; Söding, Johannes

BMC bioinformatics, 2019-09, Vol.20 (1), p.473-473, Article 473 [Periódico revisado por pares]

London: BioMed Central Ltd

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6
An Exploratory Study of Software Sustainability at Early Stages of Software Development
An Exploratory Study of Software Sustainability at Early Stages of Software Development
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An Exploratory Study of Software Sustainability at Early Stages of Software Development

Noman, Hira ; Mahoto, Naeem Ahmed ; Bhatti, Sania ; Abosaq, Hamad Ali ; Al Reshan, Mana Saleh ; Shaikh, Asadullah

Sustainability, 2022-07, Vol.14 (14), p.8596 [Periódico revisado por pares]

Basel: MDPI AG

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7
Ten simple rules on writing clean and reliable open-source scientific software
Ten simple rules on writing clean and reliable open-source scientific software
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Ten simple rules on writing clean and reliable open-source scientific software

Hunter-Zinck, Haley ; de Siqueira, Alexandre Fioravante ; Vásquez, Váleri N ; Barnes, Richard ; Martinez, Ciera C Markel, Scott

PLoS computational biology, 2021-11, Vol.17 (11), p.e1009481-e1009481 [Periódico revisado por pares]

United States: Public Library of Science

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8
Collaboration gets the most out of software
Collaboration gets the most out of software
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Collaboration gets the most out of software

Morin, Andrew ; Eisenbraun, Ben ; Key, Jason ; Sanschagrin, Paul C ; Timony, Michael A ; Ottaviano, Michelle ; Sliz, Piotr

eLife, 2013-09, Vol.2, p.e01456-e01456 [Periódico revisado por pares]

England: eLife Sciences Publications Ltd

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9
Brain Modeling ToolKit: An open source software suite for multiscale modeling of brain circuits
Brain Modeling ToolKit: An open source software suite for multiscale modeling of brain circuits
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Brain Modeling ToolKit: An open source software suite for multiscale modeling of brain circuits

Dai, Kael ; Gratiy, Sergey L ; Billeh, Yazan N ; Xu, Richard ; Cai, Binghuang ; Cain, Nicholas ; Rimehaug, Atle E ; Stasik, Alexander J ; Einevoll, Gaute T ; Mihalas, Stefan ; Koch, Christof ; Arkhipov, Anton Marinazzo, Daniele

PLoS computational biology, 2020-11, Vol.16 (11), p.e1008386-e1008386 [Periódico revisado por pares]

United States: Public Library of Science

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10
OpenSim: Simulating musculoskeletal dynamics and neuromuscular control to study human and animal movement
OpenSim: Simulating musculoskeletal dynamics and neuromuscular control to study human and animal movement
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OpenSim: Simulating musculoskeletal dynamics and neuromuscular control to study human and animal movement

Seth, Ajay ; Hicks, Jennifer L ; Uchida, Thomas K ; Habib, Ayman ; Dembia, Christopher L ; Dunne, James J ; Ong, Carmichael F ; DeMers, Matthew S ; Rajagopal, Apoorva ; Millard, Matthew ; Hamner, Samuel R ; Arnold, Edith M ; Yong, Jennifer R ; Lakshmikanth, Shrinidhi K ; Sherman, Michael A ; Ku, Joy P ; Delp, Scott L Schneidman, Dina

PLoS computational biology, 2018-07, Vol.14 (7), p.e1006223-e1006223 [Periódico revisado por pares]

United States: Public Library of Science

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