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Developments and opportunities in fungal strain engineering for the production of novel enzymes and enzyme cocktails for plant biomass degradation
Developments and opportunities in fungal strain engineering for the production of novel enzymes and enzyme cocktails for plant biomass degradation
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Developments and opportunities in fungal strain engineering for the production of novel enzymes and enzyme cocktails for plant biomass degradation

Kun, Roland S. ; Gomes, Ana Carolina S. ; Hildén, Kristiina S. ; Salazar Cerezo, Sonia ; Mäkelä, Miia R. ; de Vries, Ronald P.

Biotechnology advances, 2019-11, Vol.37 (6), p.107361, Article 107361 [Periódico revisado por pares]

England: Elsevier Inc

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2
Aromatic Metabolism of Filamentous Fungi in Relation to the Presence of Aromatic Compounds in Plant Biomass
Aromatic Metabolism of Filamentous Fungi in Relation to the Presence of Aromatic Compounds in Plant Biomass
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Aromatic Metabolism of Filamentous Fungi in Relation to the Presence of Aromatic Compounds in Plant Biomass

Mäkelä, Miia R ; Marinović, Mila ; Nousiainen, Paula ; Liwanag, April J M ; Benoit, Isabelle ; Sipilä, Jussi ; Hatakka, Annele ; de Vries, Ronald P ; Hildén, Kristiina S

Advances in Applied Microbiology, 2015, Vol.91, p.63-137 [Periódico revisado por pares]

United States: Elsevier Science & Technology

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3
Colonies of the fungus Aspergillus niger are highly differentiated to adapt to local carbon source variation
Colonies of the fungus Aspergillus niger are highly differentiated to adapt to local carbon source variation
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Colonies of the fungus Aspergillus niger are highly differentiated to adapt to local carbon source variation

Daly, Paul ; Peng, Mao ; Mitchell, Hugh D. ; Kim, Young‐Mo ; Ansong, Charles ; Brewer, Heather ; Gijsel, Peter ; Lipton, Mary S. ; Markillie, Lye Meng ; Nicora, Carrie D. ; Orr, Galya ; Wiebenga, Ad ; Hildén, Kristiina S. ; Kabel, Mirjam A. ; Baker, Scott E. ; Mäkelä, Miia R. ; Vries, Ronald P.

Environmental microbiology, 2020-03, Vol.22 (3), p.1154-1166 [Periódico revisado por pares]

Hoboken, USA: John Wiley & Sons, Inc

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4
An improved and reproducible protocol for the extraction of high quality fungal RNA from plant biomass substrates
An improved and reproducible protocol for the extraction of high quality fungal RNA from plant biomass substrates
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An improved and reproducible protocol for the extraction of high quality fungal RNA from plant biomass substrates

Patyshakuliyeva, Aleksandrina ; Mäkelä, Miia R. ; Sietiö, Outi-Maaria ; de Vries, Ronald P. ; Hildén, Kristiina S.

Fungal genetics and biology, 2014-11, Vol.72, p.201-206 [Periódico revisado por pares]

United States: Elsevier Inc

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5
Uncovering the abilities of Agaricus bisporus to degrade plant biomass throughout its life cycle
Uncovering the abilities of Agaricus bisporus to degrade plant biomass throughout its life cycle
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Uncovering the abilities of Agaricus bisporus to degrade plant biomass throughout its life cycle

Patyshakuliyeva, Aleksandrina ; Post, Harm ; Zhou, Miaomiao ; Jurak, Edita ; Heck, Albert J. R. ; Hildén, Kristiina S. ; Kabel, Mirjam A. ; Mäkelä, Miia R. ; Altelaar, Maarten A. F. ; de Vries, Ronald P.

Environmental microbiology, 2015-08, Vol.17 (8), p.3098-3109 [Periódico revisado por pares]

England: Blackwell Publishing Ltd

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6
Closely related fungi employ diverse enzymatic strategies to degrade plant biomass
Closely related fungi employ diverse enzymatic strategies to degrade plant biomass
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Closely related fungi employ diverse enzymatic strategies to degrade plant biomass

Benoit, Isabelle ; Culleton, Helena ; Zhou, Miaomiao ; DiFalco, Marcos ; Aguilar-Osorio, Guillermo ; Battaglia, Evy ; Bouzid, Ourdia ; Brouwer, Carlo P J M ; El-Bushari, Hala B O ; Coutinho, Pedro M ; Gruben, Birgit S ; Hildén, Kristiina S ; Houbraken, Jos ; Barboza, Luis Alexis Jiménez ; Levasseur, Anthony ; Majoor, Eline ; Mäkelä, Miia R ; Narang, Hari-Mander ; Trejo-Aguilar, Blanca ; van den Brink, Joost ; vanKuyk, Patricia A ; Wiebenga, Ad ; McKie, Vincent ; McCleary, Barry ; Tsang, Adrian ; Henrissat, Bernard ; de Vries, Ronald P

Biotechnology for biofuels, 2015-08, Vol.8 (1), p.107-107, Article 107

England: BioMed Central Ltd

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7
Diversity of fungal feruloyl esterases: updated phylogenetic classification, properties, and industrial applications
Diversity of fungal feruloyl esterases: updated phylogenetic classification, properties, and industrial applications
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Diversity of fungal feruloyl esterases: updated phylogenetic classification, properties, and industrial applications

Dilokpimol, Adiphol ; Mäkelä, Miia R ; Aguilar-Pontes, Maria Victoria ; Benoit-Gelber, Isabelle ; Hildén, Kristiina S ; de Vries, Ronald P

Biotechnology for biofuels, 2016-10, Vol.9 (1), p.231-231, Article 231

England: BioMed Central Ltd

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8
Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus
Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus
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Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus

de Vries, Ronald P ; Riley, Robert ; Wiebenga, Ad ; Aguilar-Osorio, Guillermo ; Amillis, Sotiris ; Uchima, Cristiane Akemi ; Asadollahi, Mojtaba ; Askin, Marion ; Barry, Kerrie ; Battaglia, Evy ; Bayram, Özgür ; Benocci, Tiziano ; Braus-Stromeyer, Susanna A ; Caldana, Camila ; Cánovas, David ; Cerqueira, Gustavo C ; Chen, Fusheng ; Clum, Alicia ; Dos Santos, Renato Augusto Corrêa ; Damásio, André Ricardo de Lima ; Diallinas, George ; Emri, Tamás ; Fekete, Erzsébet ; Flipphi, Michel ; Freyberg, Susanne ; Habgood, Rob ; Hainaut, Matthieu ; Harispe, María Laura ; Henrissat, Bernard ; Hildén, Kristiina S ; Hope, Ryan ; Hossain, Abeer ; Karabika, Eugenia ; Karaffa, Levente ; Karányi, Zsolt ; Kraševec, Nada ; Kuo, Alan ; Kusch, Harald ; LaButti, Kurt ; Lagendijk, Ellen L ; Lapidus, Alla ; Levasseur, Anthony ; Lindquist, Erika ; Lipzen, Anna ; MacCabe, Andrew ; Melin, Petter ; Meyer, Vera ; Mielnichuk, Natalia ; Miskei, Márton ; Molnár, Ákos P ; Mulé, Giuseppina ; Ngan, Chew Yee ; Orejas, Margarita ; Orosz, Erzsébet ; Ouedraogo, Jean Paul ; Overkamp, Karin M ; Park, Hee-Soo ; Perrone, Giancarlo ; Ram, Arthur F J ; Ramón, Ana ; Rauscher, Stefan ; Record, Eric ; Riaño-Pachón, Diego Mauricio ; Röhrig, Julian ; Ruller, Roberto ; Salamov, Asaf ; Salih, Nadhira S ; Samson, Rob A ; Sándor, Erzsébet ; Sanguinetti, Manuel ; Schütze, Tabea ; Sepčić, Kristina ; Shelest, Ekaterina ; Sherlock, Gavin ; Squina, Fabio M ; Sun, Hui ; Susca, Antonia ; Todd, Richard B ; Tsang, Adrian ; Unkles, Shiela E ; van de Wiele, Nathalie ; van Rossen-Uffink, Diana ; Oliveira, Juliana Velasco de Castro ; Visser, Jaap ; Yu, Jae-Hyuk ; Zhou, Miaomiao ; Archer, David B ; Baker, Scott E ; Benoit, Isabelle ; Braus, Gerhard H ; Fischer, Reinhard ; Frisvad, Jens C ; Goldman, Gustavo H ; Houbraken, Jos ; Oakley, Berl ; Pócsi, István ; Scazzocchio, Claudio ; Seiboth, Bernhard ; Wortman, Jennifer ; Grigoriev, Igor V

Genome Biology, 2017-02, Vol.18 (1), p.28, Article 28 [Periódico revisado por pares]

England: BioMed Central

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9
Comparative analysis of basidiomycete transcriptomes reveals a core set of expressed genes encoding plant biomass degrading enzymes
Comparative analysis of basidiomycete transcriptomes reveals a core set of expressed genes encoding plant biomass degrading enzymes
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Comparative analysis of basidiomycete transcriptomes reveals a core set of expressed genes encoding plant biomass degrading enzymes

Peng, Mao ; Aguilar-Pontes, Maria Victoria ; Hainaut, Matthieu ; Henrissat, Bernard ; Hildén, Kristiina ; Mäkelä, Miia R. ; de Vries, Ronald P.

Fungal genetics and biology, 2018-03, Vol.112, p.40-46 [Periódico revisado por pares]

United States: Elsevier Inc

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10
Characterization of a feruloyl esterase from Aspergillus terreus facilitates the division of fungal enzymes from Carbohydrate Esterase family 1 of the carbohydrate‐active enzymes (CAZy) database
Characterization of a feruloyl esterase from Aspergillus terreus facilitates the division of fungal enzymes from Carbohydrate Esterase family 1 of the carbohydrate‐active enzymes (CAZy) database
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Characterization of a feruloyl esterase from Aspergillus terreus facilitates the division of fungal enzymes from Carbohydrate Esterase family 1 of the carbohydrate‐active enzymes (CAZy) database

Mäkelä, Miia R. ; Dilokpimol, Adiphol ; Koskela, Salla M. ; Kuuskeri, Jaana ; de Vries, Ronald P. ; Hildén, Kristiina

Microbial biotechnology, 2018-09, Vol.11 (5), p.869-880 [Periódico revisado por pares]

United States: John Wiley & Sons, Inc

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