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1
Comprehensive annotation of secondary metabolite biosynthetic genes and gene clusters of Aspergillus nidulans, A. fumigatus, A. niger and A. oryzae
Comprehensive annotation of secondary metabolite biosynthetic genes and gene clusters of Aspergillus nidulans, A. fumigatus, A. niger and A. oryzae
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Comprehensive annotation of secondary metabolite biosynthetic genes and gene clusters of Aspergillus nidulans, A. fumigatus, A. niger and A. oryzae

Inglis, Diane O ; Binkley, Jonathan ; Skrzypek, Marek S ; Arnaud, Martha B ; Cerqueira, Gustavo C ; Shah, Prachi ; Wymore, Farrell ; Wortman, Jennifer R ; Sherlock, Gavin

BMC microbiology, 2013-04, Vol.13 (1), p.91-91, Article 91 [Periódico revisado por pares]

England: BioMed Central Ltd

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2
Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement
Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement
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Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement

Walker, Bruce J ; Abeel, Thomas ; Shea, Terrance ; Priest, Margaret ; Abouelliel, Amr ; Sakthikumar, Sharadha ; Cuomo, Christina A ; Zeng, Qiandong ; Wortman, Jennifer ; Young, Sarah K ; Earl, Ashlee M Wang, Junwen

PloS one, 2014-11, Vol.9 (11), p.e112963-e112963 [Periódico revisado por pares]

United States: Public Library of Science

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3
Adaptive Contract Design for Crowdsourcing Markets: Bandit Algorithms for Repeated Principal-Agent Problems
Adaptive Contract Design for Crowdsourcing Markets: Bandit Algorithms for Repeated Principal-Agent Problems
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Adaptive Contract Design for Crowdsourcing Markets: Bandit Algorithms for Repeated Principal-Agent Problems

Ho, Chien-Ju ; Slivkins, Aleksandrs ; Vaughan, Jennifer Wortman

The Journal of artificial intelligence research, 2016-01, Vol.55, p.317-359 [Periódico revisado por pares]

San Francisco: AI Access Foundation

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4
How do authors' perceptions of their papers compare with co-authors' perceptions and peer-review decisions?
How do authors' perceptions of their papers compare with co-authors' perceptions and peer-review decisions?
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How do authors' perceptions of their papers compare with co-authors' perceptions and peer-review decisions?

Rastogi, Charvi ; Stelmakh, Ivan ; Beygelzimer, Alina ; Dauphin, Yann N ; Liang, Percy ; Wortman Vaughan, Jennifer ; Xue, Zhenyu ; Daumé Iii, Hal ; Pierson, Emma ; Shah, Nihar B Otterbring, Tobias

PloS one, 2024-04, Vol.19 (4), p.e0300710-e0300710 [Periódico revisado por pares]

United States: Public Library of Science

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5
Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus
Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus
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Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus

Fedorova, Natalie D ; Khaldi, Nora ; Joardar, Vinita S ; Maiti, Rama ; Amedeo, Paolo ; Anderson, Michael J ; Crabtree, Jonathan ; Silva, Joana C ; Badger, Jonathan H ; Albarraq, Ahmed ; Angiuoli, Sam ; Bussey, Howard ; Bowyer, Paul ; Cotty, Peter J ; Dyer, Paul S ; Egan, Amy ; Galens, Kevin ; Fraser-Liggett, Claire M ; Haas, Brian J ; Inman, Jason M ; Kent, Richard ; Lemieux, Sebastien ; Malavazi, Iran ; Orvis, Joshua ; Roemer, Terry ; Ronning, Catherine M ; Sundaram, Jaideep P ; Sutton, Granger ; Turner, Geoff ; Venter, J Craig ; White, Owen R ; Whitty, Brett R ; Youngman, Phil ; Wolfe, Kenneth H ; Goldman, Gustavo H ; Wortman, Jennifer R ; Jiang, Bo ; Denning, David W ; Nierman, William C Richardson, Paul M.

PLoS genetics, 2008-04, Vol.4 (4), p.e1000046-e1000046 [Periódico revisado por pares]

United States: Public Library of Science

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6
The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations
The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations
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The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations

Cerqueira, Gustavo C ; Arnaud, Martha B ; Inglis, Diane O ; Skrzypek, Marek S ; Binkley, Gail ; Simison, Matt ; Miyasato, Stuart R ; Binkley, Jonathan ; Orvis, Joshua ; Shah, Prachi ; Wymore, Farrell ; Sherlock, Gavin ; Wortman, Jennifer R

Nucleic acids research, 2014-01, Vol.42 (Database issue), p.D705-D710 [Periódico revisado por pares]

England: Oxford University Press

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7
Transcriptional regulation of chemical diversity in Aspergillus fumigatus by LaeA
Transcriptional regulation of chemical diversity in Aspergillus fumigatus by LaeA
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Transcriptional regulation of chemical diversity in Aspergillus fumigatus by LaeA

Perrin, Robyn M ; Fedorova, Natalie D ; Bok, Jin Woo ; Cramer, Robert A ; Wortman, Jennifer R ; Kim, H Stanley ; Nierman, William C ; Keller, Nancy P Filler, Scott G

PLoS pathogens, 2007-04, Vol.3 (4), p.e50 [Periódico revisado por pares]

United States: Public Library of Science

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8
Evolution of Extensively Drug-Resistant Tuberculosis over Four Decades: Whole Genome Sequencing and Dating Analysis of Mycobacterium tuberculosis Isolates from KwaZulu-Natal
Evolution of Extensively Drug-Resistant Tuberculosis over Four Decades: Whole Genome Sequencing and Dating Analysis of Mycobacterium tuberculosis Isolates from KwaZulu-Natal
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Evolution of Extensively Drug-Resistant Tuberculosis over Four Decades: Whole Genome Sequencing and Dating Analysis of Mycobacterium tuberculosis Isolates from KwaZulu-Natal

Cohen, Keira A ; Abeel, Thomas ; Manson McGuire, Abigail ; Desjardins, Christopher A ; Munsamy, Vanisha ; Shea, Terrance P ; Walker, Bruce J ; Bantubani, Nonkqubela ; Almeida, Deepak V ; Alvarado, Lucia ; Chapman, Sinéad B ; Mvelase, Nomonde R ; Duffy, Eamon Y ; Fitzgerald, Michael G ; Govender, Pamla ; Gujja, Sharvari ; Hamilton, Susanna ; Howarth, Clinton ; Larimer, Jeffrey D ; Maharaj, Kashmeel ; Pearson, Matthew D ; Priest, Margaret E ; Zeng, Qiandong ; Padayatchi, Nesri ; Grosset, Jacques ; Young, Sarah K ; Wortman, Jennifer ; Mlisana, Koleka P ; O'Donnell, Max R ; Birren, Bruce W ; Bishai, William R ; Pym, Alexander S ; Earl, Ashlee M Metcalfe, John Z

PLoS medicine, 2015-09, Vol.12 (9), p.e1001880-e1001880 [Periódico revisado por pares]

United States: Public Library of Science

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9
Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome
Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome
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Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome

Hamilton, Eileen P ; Kapusta, Aurélie ; Huvos, Piroska E ; Bidwell, Shelby L ; Zafar, Nikhat ; Tang, Haibao ; Hadjithomas, Michalis ; Krishnakumar, Vivek ; Badger, Jonathan H ; Caler, Elisabet V ; Russ, Carsten ; Zeng, Qiandong ; Fan, Lin ; Levin, Joshua Z ; Shea, Terrance ; Young, Sarah K ; Hegarty, Ryan ; Daza, Riza ; Gujja, Sharvari ; Wortman, Jennifer R ; Birren, Bruce W ; Nusbaum, Chad ; Thomas, Jainy ; Carey, Clayton M ; Pritham, Ellen J ; Feschotte, Cédric ; Noto, Tomoko ; Mochizuki, Kazufumi ; Papazyan, Romeo ; Taverna, Sean D ; Dear, Paul H ; Cassidy-Hanley, Donna M ; Xiong, Jie ; Miao, Wei ; Orias, Eduardo ; Coyne, Robert S

eLife, 2016-11, Vol.5 [Periódico revisado por pares]

England: eLife Sciences Publications Ltd

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10
Emergence of epidemic multidrug-resistant Enterococcus faecium from animal and commensal strains
Emergence of epidemic multidrug-resistant Enterococcus faecium from animal and commensal strains
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Emergence of epidemic multidrug-resistant Enterococcus faecium from animal and commensal strains

Lebreton, François ; van Schaik, Willem ; McGuire, Abigail Manson ; Godfrey, Paul ; Griggs, Allison ; Mazumdar, Varun ; Corander, Jukka ; Cheng, Lu ; Saif, Sakina ; Young, Sarah ; Zeng, Qiandong ; Wortman, Jennifer ; Birren, Bruce ; Willems, Rob J L ; Earl, Ashlee M ; Gilmore, Michael S McDaniel, Larry S.

mBio, 2013-08, Vol.4 (4) [Periódico revisado por pares]

United States: American Society of Microbiology

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