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MOFA+: a statistical framework for comprehensive integration of multi-modal single-cell data
MOFA+: a statistical framework for comprehensive integration of multi-modal single-cell data
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MOFA+: a statistical framework for comprehensive integration of multi-modal single-cell data

Argelaguet, Ricard ; Arnol, Damien ; Bredikhin, Danila ; Deloro, Yonatan ; Velten, Britta ; Marioni, John C ; Stegle, Oliver

Genome Biology, 2020-05, Vol.21 (1), p.111-111, Article 111 [Periódico revisado por pares]

England: BioMed Central

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2
Multi‐Omics Factor Analysis—a framework for unsupervised integration of multi‐omics data sets
Multi‐Omics Factor Analysis—a framework for unsupervised integration of multi‐omics data sets
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Multi‐Omics Factor Analysis—a framework for unsupervised integration of multi‐omics data sets

Argelaguet, Ricard ; Velten, Britta ; Arnol, Damien ; Dietrich, Sascha ; Zenz, Thorsten ; Marioni, John C ; Buettner, Florian ; Huber, Wolfgang ; Stegle, Oliver

Molecular systems biology, 2018-06, Vol.14 (6), p.e8124-n/a [Periódico revisado por pares]

England: EMBO Press

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3
EmptyDrops: distinguishing cells from empty droplets in droplet-based single-cell RNA sequencing data
EmptyDrops: distinguishing cells from empty droplets in droplet-based single-cell RNA sequencing data
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EmptyDrops: distinguishing cells from empty droplets in droplet-based single-cell RNA sequencing data

Lun, Aaron T L ; Riesenfeld, Samantha ; Andrews, Tallulah ; Dao, The Phuong ; Gomes, Tomas ; Marioni, John C

Genome Biology, 2019-03, Vol.20 (1), p.63-63, Article 63 [Periódico revisado por pares]

England: BioMed Central

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4
Using single‐cell genomics to understand developmental processes and cell fate decisions
Using single‐cell genomics to understand developmental processes and cell fate decisions
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Using single‐cell genomics to understand developmental processes and cell fate decisions

Griffiths, Jonathan A ; Scialdone, Antonio ; Marioni, John C

Molecular systems biology, 2018-04, Vol.14 (4), p.e8046-n/a [Periódico revisado por pares]

England: EMBO Press

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5
Staged developmental mapping and X chromosome transcriptional dynamics during mouse spermatogenesis
Staged developmental mapping and X chromosome transcriptional dynamics during mouse spermatogenesis
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Staged developmental mapping and X chromosome transcriptional dynamics during mouse spermatogenesis

Ernst, Christina ; Eling, Nils ; Martinez-Jimenez, Celia P ; Marioni, John C ; Odom, Duncan T

Nature communications, 2019-03, Vol.10 (1), p.1251-1251, Article 1251 [Periódico revisado por pares]

England: Nature Publishing Group

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6
scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells
scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells
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scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells

Clark, Stephen J ; Argelaguet, Ricard ; Kapourani, Chantriolnt-Andreas ; Stubbs, Thomas M ; Lee, Heather J ; Alda-Catalinas, Celia ; Krueger, Felix ; Sanguinetti, Guido ; Kelsey, Gavin ; Marioni, John C ; Stegle, Oliver ; Reik, Wolf

Nature communications, 2018-02, Vol.9 (1), p.781-9, Article 781 [Periódico revisado por pares]

England: Nature Publishing Group

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7
Detection and removal of barcode swapping in single-cell RNA-seq data
Detection and removal of barcode swapping in single-cell RNA-seq data
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Detection and removal of barcode swapping in single-cell RNA-seq data

Griffiths, Jonathan A ; Richard, Arianne C ; Bach, Karsten ; Lun, Aaron T L ; Marioni, John C

Nature communications, 2018-07, Vol.9 (1), p.2667-6, Article 2667 [Periódico revisado por pares]

England: Nature Publishing Group

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8
Inferring the kinetics of stochastic gene expression from single-cell RNA-sequencing data
Inferring the kinetics of stochastic gene expression from single-cell RNA-sequencing data
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Inferring the kinetics of stochastic gene expression from single-cell RNA-sequencing data

Kim, Jong Kyoung ; Marioni, John C

Genome biology, 2013-01, Vol.14 (1), p.R7-R7 [Periódico revisado por pares]

England: Springer-Verlag

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9
Differentiation dynamics of mammary epithelial cells revealed by single-cell RNA sequencing
Differentiation dynamics of mammary epithelial cells revealed by single-cell RNA sequencing
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Differentiation dynamics of mammary epithelial cells revealed by single-cell RNA sequencing

Bach, Karsten ; Pensa, Sara ; Grzelak, Marta ; Hadfield, James ; Adams, David J ; Marioni, John C ; Khaled, Walid T

Nature communications, 2017-12, Vol.8 (1), p.2128-11, Article 2128 [Periódico revisado por pares]

England: Nature Publishing Group

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10
EmptyDropsMultiome discriminates real cells from background in single-cell multiomics assays
EmptyDropsMultiome discriminates real cells from background in single-cell multiomics assays
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EmptyDropsMultiome discriminates real cells from background in single-cell multiomics assays

Megas, Stathis ; Lorenzi, Valentina ; Marioni, John C

Genome Biology, 2024-05, Vol.25 (1), p.121-15, Article 121 [Periódico revisado por pares]

England: BioMed Central

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