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Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential

Rabanus-Wallace, M Timothy ; Hackauf, Bernd ; Mascher, Martin ; Lux, Thomas ; Wicker, Thomas ; Gundlach, Heidrun ; Baez, Mariana ; Houben, Andreas ; Mayer, Klaus F X ; Guo, Liangliang ; Poland, Jesse ; Pozniak, Curtis J ; Walkowiak, Sean ; Melonek, Joanna ; Praz, Coraline R ; Schreiber, Mona ; Budak, Hikmet ; Heuberger, Matthias ; Steuernagel, Burkhard ; Wulff, Brande ; Börner, Andreas ; Byrns, Brook ; Čížková, Jana ; Fowler, D Brian ; Fritz, Allan ; Himmelbach, Axel ; Kaithakottil, Gemy ; Keilwagen, Jens ; Keller, Beat ; Konkin, David ; Larsen, Jamie ; Li, Qiang ; Myśków, Beata ; Padmarasu, Sudharsan ; Rawat, Nidhi ; Sesiz, Uğur ; Biyiklioglu-Kaya, Sezgi ; Sharpe, Andy ; Šimková, Hana ; Small, Ian ; Swarbreck, David ; Toegelová, Helena ; Tsvetkova, Natalia ; Voylokov, Anatoly V ; Vrána, Jan ; Bauer, Eva ; Bolibok-Bragoszewska, Hanna ; Doležel, Jaroslav ; Hall, Anthony ; Jia, Jizeng ; Korzun, Viktor ; Laroche, André ; Ma, Xue-Feng ; Ordon, Frank ; Özkan, Hakan ; Rakoczy-Trojanowska, Monika ; Scholz, Uwe ; Schulman, Alan H ; Siekmann, Dörthe ; Stojałowski, Stefan ; Tiwari, Vijay K ; Spannagl, Manuel ; Stein, Nils

Nature genetics, 2021-04, Vol.53 (4), p.564-573 [Periódico revisado por pares]

United States: Nature Publishing Group

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Título:
Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential
Autor: Rabanus-Wallace, M Timothy ; Hackauf, Bernd ; Mascher, Martin ; Lux, Thomas ; Wicker, Thomas ; Gundlach, Heidrun ; Baez, Mariana ; Houben, Andreas ; Mayer, Klaus F X ; Guo, Liangliang ; Poland, Jesse ; Pozniak, Curtis J ; Walkowiak, Sean ; Melonek, Joanna ; Praz, Coraline R ; Schreiber, Mona ; Budak, Hikmet ; Heuberger, Matthias ; Steuernagel, Burkhard ; Wulff, Brande ; Börner, Andreas ; Byrns, Brook ; Čížková, Jana ; Fowler, D Brian ; Fritz, Allan ; Himmelbach, Axel ; Kaithakottil, Gemy ; Keilwagen, Jens ; Keller, Beat ; Konkin, David ; Larsen, Jamie ; Li, Qiang ; Myśków, Beata ; Padmarasu, Sudharsan ; Rawat, Nidhi ; Sesiz, Uğur ; Biyiklioglu-Kaya, Sezgi ; Sharpe, Andy ; Šimková, Hana ; Small, Ian ; Swarbreck, David ; Toegelová, Helena ; Tsvetkova, Natalia ; Voylokov, Anatoly V ; Vrána, Jan ; Bauer, Eva ; Bolibok-Bragoszewska, Hanna ; Doležel, Jaroslav ; Hall, Anthony ; Jia, Jizeng ; Korzun, Viktor ; Laroche, André ; Ma, Xue-Feng ; Ordon, Frank ; Özkan, Hakan ; Rakoczy-Trojanowska, Monika ; Scholz, Uwe ; Schulman, Alan H ; Siekmann, Dörthe ; Stojałowski, Stefan ; Tiwari, Vijay K ; Spannagl, Manuel ; Stein, Nils
Assuntos: Adaptation, Physiological - genetics ; Agricultural production ; Agronomy ; Assembly ; Barley ; Breeding ; Cereal crops ; Chromosome Mapping - methods ; Chromosomes ; Control systems ; Crop yield ; Crops, Agricultural - genetics ; Crops, Agricultural - immunology ; Evolution ; Fertility ; Gene Expression Regulation, Plant ; Gene pool ; Genes ; Genetic aspects ; Genetic engineering ; Genetic Introgression ; Genetic isolation ; Genetic research ; Genetic resources ; Genome, Plant ; Genomes ; Genomics ; Hybrid systems ; Hybridization ; Karyotype ; Low temperature ; Low temperature resistance ; Methods ; MicroRNAs ; Natural history ; Phylogenetics ; Plant breeding ; Plant Breeding - methods ; Plant chromosomes ; Plant Immunity - genetics ; Plant Proteins - genetics ; Plant Proteins - metabolism ; Production processes ; Rye ; Secale - genetics ; Secale - immunology ; Secale cereale ; Stress, Physiological ; Temperature tolerance ; Triticum - genetics ; Wheat
É parte de: Nature genetics, 2021-04, Vol.53 (4), p.564-573
Notas: ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
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Descrição: Rye (Secale cereale L.) is an exceptionally climate-resilient cereal crop, used extensively to produce improved wheat varieties via introgressive hybridization and possessing the entire repertoire of genes necessary to enable hybrid breeding. Rye is allogamous and only recently domesticated, thus giving cultivated ryes access to a diverse and exploitable wild gene pool. To further enhance the agronomic potential of rye, we produced a chromosome-scale annotated assembly of the 7.9-gigabase rye genome and extensively validated its quality by using a suite of molecular genetic resources. We demonstrate applications of this resource with a broad range of investigations. We present findings on cultivated rye's incomplete genetic isolation from wild relatives, mechanisms of genome structural evolution, pathogen resistance, low-temperature tolerance, fertility control systems for hybrid breeding and the yield benefits of rye-wheat introgressions.
Editor: United States: Nature Publishing Group
Idioma: Inglês

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Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential

United States: Nature Publishing Group

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