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PDBsum: Structural summaries of PDB entries

Laskowski, Roman A. ; Jabłońska, Jagoda ; Pravda, Lukáš ; Vařeková, Radka Svobodová ; Thornton, Janet M.

Protein science, 2018-01, Vol.27 (1), p.129-134 [Periódico revisado por pares]

United States: Wiley Subscription Services, Inc

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Título:
PDBsum: Structural summaries of PDB entries
Autor: Laskowski, Roman A. ; Jabłońska, Jagoda ; Pravda, Lukáš ; Vařeková, Radka Svobodová ; Thornton, Janet M.
Assuntos: 3D protein structure ; Data processing ; Deoxyribonucleic acid ; DNA ; DNA structure ; enzymes ; Internet ; molecular interactions ; PDB ; PDBsum ; protein database ; Protein structure ; protein structure analysis ; Proteins ; schematic diagrams ; Secondary structure ; Servers ; Tools for Protein Science
É parte de: Protein science, 2018-01, Vol.27 (1), p.129-134
Notas: Summary
PDBsum is an atlas of proteins for which a 3D structural model has been obtained by experiment. For each, it provides a number of schematic diagrams to visualize different aspects of the protein molecule(s) in the structure, together with the molecules they interact with (e.g., bound ligands or RNA/DNA).
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Summary: PDBsum is an atlas of proteins for which a 3D structural model has been obtained by experiment. For each, it provides a number of schematic diagrams to visualize different aspects of the protein molecule(s) in the structure, together with the molecules they interact with (e.g., bound ligands or RNA/DNA).
Descrição: PDBsum is a web server providing structural information on the entries in the Protein Data Bank (PDB). The analyses are primarily image‐based and include protein secondary structure, protein‐ligand and protein‐DNA interactions, PROCHECK analyses of structural quality, and many others. The 3D structures can be viewed interactively in RasMol, PyMOL, and a JavaScript viewer called 3Dmol.js. Users can upload their own PDB files and obtain a set of password‐protected PDBsum analyses for each. The server is freely accessible to all at: http://www.ebi.ac.uk/pdbsum.
Editor: United States: Wiley Subscription Services, Inc
Idioma: Inglês

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PDBsum: Structural summaries of PDB entries

Laskowski, Roman A. ; Jabłońska, Jagoda ; Pravda, Lukáš ; Vařeková, Radka Svobodová ; Thornton, Janet M.

United States: Wiley Subscription Services, Inc

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