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Whole-Genome Sequencing and Characterization of Buffalo Genetic Resources: Recent Advances and Future Challenges

Rehman, Saif Ur ; Hassan, Faiz-Ul ; Luo, Xier ; Li, Zhipeng ; Liu, Qingyou

Animals (Basel), 2021-03, Vol.11 (3), p.904 [Periódico revisado por pares]

Switzerland: MDPI AG

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Título:
Whole-Genome Sequencing and Characterization of Buffalo Genetic Resources: Recent Advances and Future Challenges
Autor: Rehman, Saif Ur ; Hassan, Faiz-Ul ; Luo, Xier ; Li, Zhipeng ; Liu, Qingyou
Assuntos: Animals ; Breeding ; buffalo ; candidate genes ; Cattle ; Climate change adaptation ; Deoxyribonucleic acid ; Disease resistance ; DNA ; DNA sequencing ; Domestication ; evolution and domestication ; Evolutionary genetics ; Gene expression ; Gene flow ; Gene polymorphism ; Gene regulation ; Genetic diversity ; Genetic resources ; Genetic variability ; Genetic variance ; genome sequencing advancement ; Genome-wide association studies ; Genomes ; Genomics ; Genotyping ; Heredity ; Infertility ; Marker panels ; Meat ; Milk ; Next-generation sequencing ; Nucleotides ; Polymorphism ; Productivity ; Proteomics ; Review ; Rivers ; Selective breeding ; Sex chromosomes ; Single-nucleotide polymorphism ; traits ; Transcriptomics ; Whole genome sequencing
É parte de: Animals (Basel), 2021-03, Vol.11 (3), p.904
Notas: ObjectType-Article-2
SourceType-Scholarly Journals-1
ObjectType-Feature-3
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ObjectType-Review-1
Descrição: The buffalo was domesticated around 3000-6000 years ago and has substantial economic significance as a meat, dairy, and draught animal. The buffalo has remained underutilized in terms of the development of a well-annotated and assembled reference genome de novo. It is mandatory to explore the genetic architecture of a species to understand the biology that helps to manage its genetic variability, which is ultimately used for selective breeding and genomic selection. Morphological and molecular data have revealed that the swamp buffalo population has strong geographical genomic diversity with low gene flow but strong phenotypic consistency, while the river buffalo population has higher phenotypic diversity with a weak phylogeographic structure. The availability of recent high-quality reference genome and genotyping marker panels has invigorated many genome-based studies on evolutionary history, genetic diversity, functional elements, and performance traits. The increasing molecular knowledge syndicate with selective breeding should pave the way for genetic improvement in the climatic resilience, disease resistance, and production performance of water buffalo populations globally.
Editor: Switzerland: MDPI AG
Idioma: Inglês

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Whole-Genome Sequencing and Characterization of Buffalo Genetic Resources: Recent Advances and Future Challenges

Rehman, Saif Ur ; Hassan, Faiz-Ul ; Luo, Xier ; Li, Zhipeng ; Liu, Qingyou

Switzerland: MDPI AG

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