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Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics

Giacomoni, Franck ; Le Corguillé, Gildas ; Monsoor, Misharl ; Landi, Marion ; Pericard, Pierre ; Pétéra, Mélanie ; Duperier, Christophe ; Tremblay-Franco, Marie ; Martin, Jean-François ; Jacob, Daniel ; Goulitquer, Sophie ; Thévenot, Etienne A ; Caron, Christophe

Bioinformatics, 2015-05, Vol.31 (9), p.1493-1495 [Periódico revisado por pares]

England: Oxford University Press (OUP)

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Título:
Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics
Autor: Giacomoni, Franck ; Le Corguillé, Gildas ; Monsoor, Misharl ; Landi, Marion ; Pericard, Pierre ; Pétéra, Mélanie ; Duperier, Christophe ; Tremblay-Franco, Marie ; Martin, Jean-François ; Jacob, Daniel ; Goulitquer, Sophie ; Thévenot, Etienne A ; Caron, Christophe
Assuntos: Algorithms ; Applications Notes ; Biochemistry, Molecular Biology ; Bioinformatics ; Computation ; Computational Biology ; Computer Science ; Construction ; Genomics ; Infrastructure ; Life Sciences ; Metabolomics - methods ; Platforms ; Quantitative Methods ; Software ; Source code ; Virtual environments ; Workflow
É parte de: Bioinformatics, 2015-05, Vol.31 (9), p.1493-1495
Notas: ObjectType-Article-1
SourceType-Scholarly Journals-1
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The authors wish it to be known that, in their opinion, the first two authors should be regarded as Joint First Authors.
Associate Editor: Ziv Bar-Joseph
Descrição: The complex, rapidly evolving field of computational metabolomics calls for collaborative infrastructures where the large volume of new algorithms for data pre-processing, statistical analysis and annotation can be readily integrated whatever the language, evaluated on reference datasets and chained to build ad hoc workflows for users. We have developed Workflow4Metabolomics (W4M), the first fully open-source and collaborative online platform for computational metabolomics. W4M is a virtual research environment built upon the Galaxy web-based platform technology. It enables ergonomic integration, exchange and running of individual modules and workflows. Alternatively, the whole W4M framework and computational tools can be downloaded as a virtual machine for local installation. http://workflow4metabolomics.org homepage enables users to open a private account and access the infrastructure. W4M is developed and maintained by the French Bioinformatics Institute (IFB) and the French Metabolomics and Fluxomics Infrastructure (MetaboHUB). contact@workflow4metabolomics.org.
Editor: England: Oxford University Press (OUP)
Idioma: Inglês

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Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics

Giacomoni, Franck ; Le Corguillé, Gildas ; Monsoor, Misharl ; Landi, Marion ; Pericard, Pierre ; Pétéra, Mélanie ; Duperier, Christophe ; Tremblay-Franco, Marie ; Martin, Jean-François ; Jacob, Daniel ; Goulitquer, Sophie ; Thévenot, Etienne A ; Caron, Christophe

England: Oxford University Press (OUP)

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