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Somatic LINE-1 promoter acquisition drives oncogenic FOXR2 activation in pediatric brain tumor
Somatic LINE-1 promoter acquisition drives oncogenic FOXR2 activation in pediatric brain tumor
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Somatic LINE-1 promoter acquisition drives oncogenic FOXR2 activation in pediatric brain tumor

Flasch, Diane A. ; Chen, Xiaolong ; Ju, Bensheng ; Li, Xiaoyu ; Dalton, James ; Mulder, Heather L. ; Easton, John ; Wang, Lu ; Baker, Suzanne J. ; Chiang, Jason ; Zhang, Jinghui

Acta neuropathologica, 2022-05, Vol.143 (5), p.605-607 [Periódico revisado por pares]

Berlin/Heidelberg: Springer Berlin Heidelberg

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2
Integrative network analysis reveals USP7 haploinsufficiency inhibits E-protein activity in pediatric T-lineage acute lymphoblastic leukemia (T-ALL)
Integrative network analysis reveals USP7 haploinsufficiency inhibits E-protein activity in pediatric T-lineage acute lymphoblastic leukemia (T-ALL)
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Integrative network analysis reveals USP7 haploinsufficiency inhibits E-protein activity in pediatric T-lineage acute lymphoblastic leukemia (T-ALL)

Shaw, Timothy I ; Dong, Li ; Tian, Liqing ; Qian, Chenxi ; Liu, Yu ; Ju, Bensheng ; High, Anthony ; Kavdia, Kanisha ; Pagala, Vishwajeeth R ; Shaner, Bridget ; Pei, Deqing ; Easton, John ; Janke, Laura J ; Porter, Shaina N ; Ma, Xiaotu ; Cheng, Cheng ; Pruett-Miller, Shondra M ; Choi, John ; Yu, Jiyang ; Peng, Junmin ; Gu, Wei ; Look, A Thomas ; Downing, James R ; Zhang, Jinghui

Scientific reports, 2021-03, Vol.11 (1), p.5154-5154, Article 5154 [Periódico revisado por pares]

England: Nature Publishing Group

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3
Long-read sequencing unveils IGH-DUX4 translocation into the silenced IGH allele in B-cell acute lymphoblastic leukemia
Long-read sequencing unveils IGH-DUX4 translocation into the silenced IGH allele in B-cell acute lymphoblastic leukemia
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Long-read sequencing unveils IGH-DUX4 translocation into the silenced IGH allele in B-cell acute lymphoblastic leukemia

Tian, Liqing ; Shao, Ying ; Nance, Stephanie ; Dang, Jinjun ; Xu, Beisi ; Ma, Xiaotu ; Li, Yongjin ; Ju, Bensheng ; Dong, Li ; Newman, Scott ; Zhou, Xin ; Schreiner, Patrick ; Tseng, Elizabeth ; Hon, Ting ; Ashby, Meredith ; Li, Chunliang ; Easton, John ; Gruber, Tanja A ; Zhang, Jinghui

Nature communications, 2019-06, Vol.10 (1), p.2789-10, Article 2789 [Periódico revisado por pares]

England: Nature Publishing Group

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4
A comparison of methods accounting for batch effects in differential expression analysis of UMI count based single cell RNA sequencing
A comparison of methods accounting for batch effects in differential expression analysis of UMI count based single cell RNA sequencing
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A comparison of methods accounting for batch effects in differential expression analysis of UMI count based single cell RNA sequencing

Chen, Wenan ; Zhang, Silu ; Williams, Justin ; Ju, Bensheng ; Shaner, Bridget ; Easton, John ; Wu, Gang ; Chen, Xiang

Computational and structural biotechnology journal, 2020-01, Vol.18, p.861-873 [Periódico revisado por pares]

Netherlands: Elsevier B.V

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5
Conditional control of gene function by an invertible gene trap in zebrafish
Conditional control of gene function by an invertible gene trap in zebrafish
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Conditional control of gene function by an invertible gene trap in zebrafish

Ni, Terri T ; Lu, Jianjun ; Zhu, Meiying ; Maddison, Lisette A ; Boyd, Kelli L ; Huskey, Lindsey ; Ju, Bensheng ; Hesselson, Daniel ; Zhong, Tao P ; Page-McCaw, Patrick S ; Stainier, Didier Y ; Chen, Wenbiao

Proceedings of the National Academy of Sciences - PNAS, 2012-09, Vol.109 (38), p.15389-15394 [Periódico revisado por pares]

United States: National Academy of Sciences

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6
Convergent evolution and multi-wave clonal invasion in H3 K27-altered diffuse midline gliomas treated with a PDGFR inhibitor
Convergent evolution and multi-wave clonal invasion in H3 K27-altered diffuse midline gliomas treated with a PDGFR inhibitor
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Convergent evolution and multi-wave clonal invasion in H3 K27-altered diffuse midline gliomas treated with a PDGFR inhibitor

Arunachalam, Sasi ; Szlachta, Karol ; Brady, Samuel W ; Ma, Xiaotu ; Ju, Bensheng ; Shaner, Bridget ; Mulder, Heather L ; Easton, John ; Raphael, Benjamin J ; Myers, Matthew ; Tinkle, Christopher ; Allen, Sariah J ; Orr, Brent A ; Wetmore, Cynthia J ; Baker, Suzanne J ; Zhang, Jinghui

Acta neuropathologica communications, 2022-05, Vol.10 (1), p.80-80, Article 80 [Periódico revisado por pares]

England: BioMed Central Ltd

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7
Cloned zebrafish by nuclear transfer from long-term-cultured cells
Cloned zebrafish by nuclear transfer from long-term-cultured cells
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Cloned zebrafish by nuclear transfer from long-term-cultured cells

Lin, Shuo ; Lee, Ki-Young ; Huang, Haigen ; Ju, Bensheng ; Yang, Zhongan

Nature biotechnology, 2002-08, Vol.20 (8), p.795-799 [Periódico revisado por pares]

New York, NY: Nature

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8
Green fluorescent protein expression in germ‐line transmitted transgenic zebrafish under a stratified epithelial promoter from Keratin8
Green fluorescent protein expression in germ‐line transmitted transgenic zebrafish under a stratified epithelial promoter from Keratin8
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Green fluorescent protein expression in germ‐line transmitted transgenic zebrafish under a stratified epithelial promoter from Keratin8

Gong, Zhiyuan ; Ju, Bensheng ; Wang, Xukun ; He, Jiangyan ; Wan, Haiyan ; Sudha, Putter Mudumana ; Yan, Tie

Developmental dynamics, 2002-03, Vol.223 (2), p.204-215 [Periódico revisado por pares]

New York: Wiley Subscription Services, Inc., A Wiley Company

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9
The genomic landscape of diffuse intrinsic pontine glioma and pediatric non-brainstem high-grade glioma
The genomic landscape of diffuse intrinsic pontine glioma and pediatric non-brainstem high-grade glioma
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The genomic landscape of diffuse intrinsic pontine glioma and pediatric non-brainstem high-grade glioma

Wu, Gang ; Diaz, Alexander K ; Paugh, Barbara S ; Rankin, Sherri L ; Ju, Bensheng ; Li, Yongjin ; Zhu, Xiaoyan ; Qu, Chunxu ; Chen, Xiang ; Zhang, Junyuan ; Easton, John ; Edmonson, Michael ; Ma, Xiaotu ; Lu, Charles ; Nagahawatte, Panduka ; Hedlund, Erin ; Rusch, Michael ; Pounds, Stanley ; Lin, Tong ; Onar-Thomas, Arzu ; Huether, Robert ; Kriwacki, Richard ; Parker, Matthew ; Gupta, Pankaj ; Becksfort, Jared ; Wei, Lei ; Mulder, Heather L ; Boggs, Kristy ; Vadodaria, Bhavin ; Yergeau, Donald ; Russell, Jake C ; Ochoa, Kerri ; Fulton, Robert S ; Fulton, Lucinda L ; Jones, Chris ; Boop, Frederick A ; Broniscer, Alberto ; Wetmore, Cynthia ; Gajjar, Amar ; Ding, Li ; Mardis, Elaine R ; Wilson, Richard K ; Taylor, Michael R ; Downing, James R ; Ellison, David W ; Zhang, Jinghui ; Baker, Suzanne J

Nature genetics, 2014-05, Vol.46 (5), p.444-450 [Periódico revisado por pares]

United States: Nature Publishing Group

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10
Recapitulation of fast skeletal muscle development in zebrafish by transgenic expression of GFP under the mylz2 promoter
Recapitulation of fast skeletal muscle development in zebrafish by transgenic expression of GFP under the mylz2 promoter
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Recapitulation of fast skeletal muscle development in zebrafish by transgenic expression of GFP under the mylz2 promoter

Ju, Bensheng ; Chong, Shang Wei ; He, Jiangyan ; Wang, Xukun ; Xu, Yanfei ; Wan, Haiyan ; Tong, Yan ; Yan, Tie ; Korzh, Vladimir ; Gong, Zhiyuan

Developmental dynamics, 2003-05, Vol.227 (1), p.14-26 [Periódico revisado por pares]

Hoboken: Wiley Subscription Services, Inc., A Wiley Company

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