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Multi-omic analyses of changes in the tumor microenvironment of pancreatic adenocarcinoma following neoadjuvant treatment with anti-PD-1 therapy
Multi-omic analyses of changes in the tumor microenvironment of pancreatic adenocarcinoma following neoadjuvant treatment with anti-PD-1 therapy
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Multi-omic analyses of changes in the tumor microenvironment of pancreatic adenocarcinoma following neoadjuvant treatment with anti-PD-1 therapy

Li, Keyu ; Tandurella, Joseph A. ; Gai, Jessica ; Zhu, Qingfeng ; Lim, Su Jin ; Thomas, Dwayne L. ; Xia, Tao ; Mo, Guanglan ; Mitchell, Jacob T. ; Montagne, Janelle ; Lyman, Melissa ; Danilova, Ludmila V. ; Zimmerman, Jacquelyn W. ; Kinny-Köster, Benedict ; Zhang, Tengyi ; Chen, Linda ; Blair, Alex B. ; Heumann, Thatcher ; Parkinson, Rose ; Durham, Jennifer N. ; Narang, Amol K. ; Anders, Robert A. ; Wolfgang, Christopher L. ; Laheru, Daniel A. ; He, Jin ; Osipov, Arsen ; Thompson, Elizabeth D. ; Wang, Hao ; Fertig, Elana J. ; Jaffee, Elizabeth M. ; Zheng, Lei

Cancer cell, 2022-11, Vol.40 (11), p.1374-1391.e7 [Periódico revisado por pares]

United States: Elsevier Inc

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2
Novel insight into mutational landscape of head and neck squamous cell carcinoma
Novel insight into mutational landscape of head and neck squamous cell carcinoma
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Novel insight into mutational landscape of head and neck squamous cell carcinoma

Gaykalova, Daria A ; Mambo, Elizabeth ; Choudhary, Ashish ; Houghton, Jeffery ; Buddavarapu, Kalyan ; Sanford, Tiffany ; Darden, Will ; Adai, Alex ; Hadd, Andrew ; Latham, Gary ; Danilova, Ludmila V ; Bishop, Justin ; Li, Ryan J ; Westra, William H ; Hennessey, Patrick ; Koch, Wayne M ; Ochs, Michael F ; Califano, Joseph A ; Sun, Wenyue Amin, A. R. M. Ruhul

PloS one, 2014-03, Vol.9 (3), p.e93102 [Periódico revisado por pares]

United States: Public Library of Science

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3
Diagnostic utility of telomere length testing in a hospital-based setting
Diagnostic utility of telomere length testing in a hospital-based setting
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Diagnostic utility of telomere length testing in a hospital-based setting

Alder, Jonathan K. ; Hanumanthu, Vidya Sagar ; Strong, Margaret A. ; DeZern, Amy E. ; Stanley, Susan E. ; Takemoto, Clifford M. ; Danilova, Ludmila ; Applegate, Carolyn D. ; Bolton, Stephen G. ; Mohr, David W. ; Brodsky, Robert A. ; Casella, James F. ; Greider, Carol W. ; Jackson, J. Brooks ; Armanios, Mary

Proceedings of the National Academy of Sciences - PNAS, 2018-03, Vol.115 (10), p.E2358-E2365 [Periódico revisado por pares]

United States: National Academy of Sciences

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4
Cytokines secreted by stromal cells in TNBC microenvironment as potential targets for cancer therapy
Cytokines secreted by stromal cells in TNBC microenvironment as potential targets for cancer therapy
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Cytokines secreted by stromal cells in TNBC microenvironment as potential targets for cancer therapy

Malone, Marie K. ; Smrekar, Karly ; Park, Sunju ; Blakely, Brianna ; Walter, Alec ; Nasta, Nicholas ; Park, Jay ; Considine, Michael ; Danilova, Ludmila V. ; Pandey, Niranjan B. ; Fertig, Elana J. ; Popel, Aleksander S. ; Jin, Kideok

Cancer biology & therapy, 2020-06, Vol.21 (6), p.560-569 [Periódico revisado por pares]

United States: Taylor & Francis

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5
A Novel Functional Splice Variant of AKT3 Defined by Analysis of Alternative Splice Expression in HPV-Positive Oropharyngeal Cancers
A Novel Functional Splice Variant of AKT3 Defined by Analysis of Alternative Splice Expression in HPV-Positive Oropharyngeal Cancers
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A Novel Functional Splice Variant of AKT3 Defined by Analysis of Alternative Splice Expression in HPV-Positive Oropharyngeal Cancers

Guo, Theresa ; Sakai, Akihiro ; Afsari, Bahman ; Considine, Michael ; Danilova, Ludmila ; Favorov, Alexander V ; Yegnasubramanian, Srinivasan ; Kelley, Dylan Z ; Flam, Emily ; Ha, Patrick K ; Khan, Zubair ; Wheelan, Sarah J ; Gutkind, J Silvio ; Fertig, Elana J ; Gaykalova, Daria A ; Califano, Joseph

Cancer research (Chicago, Ill.), 2017-10, Vol.77 (19), p.5248-5258 [Periódico revisado por pares]

United States: American Association for Cancer Research, Inc

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6
Epigenetic regulation of gene expression in cancer: techniques, resources and analysis
Epigenetic regulation of gene expression in cancer: techniques, resources and analysis
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Epigenetic regulation of gene expression in cancer: techniques, resources and analysis

Kagohara, Luciane T ; Stein-O’Brien, Genevieve L ; Kelley, Dylan ; Flam, Emily ; Wick, Heather C ; Danilova, Ludmila V ; Easwaran, Hariharan ; Favorov, Alexander V ; Qian, Jiang ; Gaykalova, Daria A ; Fertig, Elana J

Briefings in functional genomics, 2018-01, Vol.17 (1), p.49-63

England: Oxford University Press

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7
DNA-methylation for the detection and distinction of 19 human malignancies
DNA-methylation for the detection and distinction of 19 human malignancies
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DNA-methylation for the detection and distinction of 19 human malignancies

Danilova, Ludmila ; Wrangle, John ; Herman, James G. ; Cope, Leslie

Epigenetics, 2022-02, Vol.17 (2), p.191-201 [Periódico revisado por pares]

United States: Taylor & Francis

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8
Non-invasive detection of urothelial cancer through the analysis of driver gene mutations and aneuploidy
Non-invasive detection of urothelial cancer through the analysis of driver gene mutations and aneuploidy
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Non-invasive detection of urothelial cancer through the analysis of driver gene mutations and aneuploidy

Springer, Simeon U ; Chen, Chung-Hsin ; Rodriguez Pena, Maria Del Carmen ; Li, Lu ; Douville, Christopher ; Wang, Yuxuan ; Cohen, Joshua David ; Taheri, Diana ; Silliman, Natalie ; Schaefer, Joy ; Ptak, Janine ; Dobbyn, Lisa ; Papoli, Maria ; Kinde, Isaac ; Afsari, Bahman ; Tregnago, Aline C ; Bezerra, Stephania M ; VandenBussche, Christopher ; Fujita, Kazutoshi ; Ertoy, Dilek ; Cunha, Isabela W ; Yu, Lijia ; Bivalacqua, Trinity J ; Grollman, Arthur P ; Diaz, Luis A ; Karchin, Rachel ; Danilova, Ludmila ; Huang, Chao-Yuan ; Shun, Chia-Tung ; Turesky, Robert J ; Yun, Byeong Hwa ; Rosenquist, Thomas A ; Pu, Yeong-Shiau ; Hruban, Ralph H ; Tomasetti, Cristian ; Papadopoulos, Nickolas ; Kinzler, Ken W ; Vogelstein, Bert ; Dickman, Kathleen G ; Netto, George J

eLife, 2018-03, Vol.7 [Periódico revisado por pares]

England: eLife Sciences Publications Ltd

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9
Correction: Novel Insight into Mutational Landscape of Head and Neck Squamous Cell Carcinoma
Correction: Novel Insight into Mutational Landscape of Head and Neck Squamous Cell Carcinoma
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Correction: Novel Insight into Mutational Landscape of Head and Neck Squamous Cell Carcinoma

Gaykalova, Daria A ; Mambo, Elizabeth ; Choudhary, Ashish ; Houghton, Jeffery ; Buddavarapu, Kalyan ; Sanford, Tiffany ; Darden, Will ; Adai, Alex ; Hadd, Andrew ; Latham, Gary ; Danilova, Ludmila V ; Bishop, Justin ; Li, Ryan J ; Westra, William H ; Hennessey, Patrick ; Koch, Wayne M ; Ochs, Michael F ; Califano, Joseph A ; Sun, Wenyue

PloS one, 2020-05, Vol.15 (5), p.e0233409-e0233409 [Periódico revisado por pares]

United States: Public Library of Science

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10
Preferential activation of the hedgehog pathway by epigenetic modulations in HPV negative HNSCC identified with meta-pathway analysis
Preferential activation of the hedgehog pathway by epigenetic modulations in HPV negative HNSCC identified with meta-pathway analysis
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Preferential activation of the hedgehog pathway by epigenetic modulations in HPV negative HNSCC identified with meta-pathway analysis

Fertig, Elana J ; Markovic, Ana ; Danilova, Ludmila V ; Gaykalova, Daria A ; Cope, Leslie ; Chung, Christine H ; Ochs, Michael F ; Califano, Joseph A Ramqvist, Torbjörn

PloS one, 2013-11, Vol.8 (11), p.e78127-e78127 [Periódico revisado por pares]

United States: Public Library of Science

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