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Material Type: Artigo
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The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 updateAfgan, Enis ; Nekrutenko, Anton ; Grüning, Bjórn A ; Blankenberg, Daniel ; Goecks, Jeremy ; Schatz, Michael C ; Ostrovsky, Alexander E ; Mahmoud, Alexandru ; Lonie, Andrew J ; Syme, Anna ; Bretaudeau, Anthony ; Kumar, Anup ; Eschenlauer, Arthur C ; DeSanto, Assunta D ; Guerler, Aysam ; Serrano-Solano, Beatriz ; Batut, Bérénice ; Grüning, Björn A ; Langhorst, Bradley W ; Carr, Bridget ; Raubenolt, Bryan A ; Hyde, Cameron J ; Bromhead, Catherine J ; Barnett, Christopher B ; Royaux, Coline ; Gallardo, Cristóbal ; Fornika, Daniel J ; Baker, Dannon ; Bouvier, Dave ; Clements, Dave ; de Lima Morais, David A ; Tabernero, David Lopez ; Lariviere, Delphine ; Nasr, Engy ; Zambelli, Federico ; Heyl, Florian ; Psomopoulos, Fotis ; Coppens, Frederik ; Price, Gareth R ; Cuccuru, Gianmauro ; Corguillé, Gildas Le ; Von Kuster, Greg ; Akbulut, Gulsum Gudukbay ; Rasche, Helena ; Hotz, Hans-Rudolf ; Eguinoa, Ignacio ; Makunin, Igor ; Ranawaka, Isuru J ; Taylor, James P ; Joshi, Jayadev ; Hillman-Jackson, Jennifer ; Chilton, John M ; Kamali, Kaivan ; Suderman, Keith ; Poterlowicz, Krzysztof ; Yvan, Le Bras ; Lopez-Delisle, Lucille ; Sargent, Luke ; Bassetti, Madeline E ; Tangaro, Marco Antonio ; van den Beek, Marius ; Čech, Martin ; Bernt, Matthias ; Fahrner, Matthias ; Tekman, Mehmet ; Föll, Melanie C ; Crusoe, Michael R ; Roncoroni, Miguel ; Kucher, Natalie ; Coraor, Nate ; Stoler, Nicholas ; Rhodes, Nick ; Soranzo, Nicola ; Pinter, Niko ; Goonasekera, Nuwan A ; Moreno, Pablo A ; Videm, Pavankumar ; Melanie, Petera ; Mandreoli, Pietro ; Jagtap, Pratik D ; Gu, Qiang ; Weber, Ralf J M ; Lazarus, Ross ; Vorderman, Ruben H P ; Hiltemann, Saskia ; Golitsynskiy, Sergey ; Garg, Shilpa ; Bray, Simon A ; Gladman, Simon L ; Leo, Simone ; Mehta, Subina P ; Griffin, Timothy J ; Jalili, Vahid ; Yves, Vandenbrouck ; Wen, Victor ; Nagampalli, Vijay K ; Bacon, Wendi A ; de Koning, Willem ; Maier, Wolfgang ; Briggs, Peter JNucleic acids research, 2022-07, Vol.50 (W1), p.W345-W351 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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Dysbiotic salivary microbiota in dry mouth and primary Sjögren's syndrome patientsRusthen, S ; Kristoffersen, A K ; Young, A ; Galtung, H K ; Petrovski, B É ; Palm, Ø ; Enersen, M ; Jensen, J L Appel, SilkePloS one, 2019-06, Vol.14 (6), p.e0218319-e0218319 [Periódico revisado por pares]United States: Public Library of ScienceTexto completo disponível |
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Material Type: Artigo
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CRISPR screening using an expanded toolkit of autophagy reporters identifies TMEM41B as a novel autophagy factorShoemaker, Christopher J ; Huang, Tina Q ; Weir, Nicholas R ; Polyakov, Nicole J ; Schultz, Sebastian W ; Denic, Vladimir Simonsen, AnnePLoS Biology, 2019-04, Vol.17 (4), p.e2007044-e2007044 [Periódico revisado por pares]United States: Public Library of ScienceTexto completo disponível |
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Material Type: Artigo
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JASPAR 2020: update of the open-access database of transcription factor binding profilesFornes, Oriol ; Castro-Mondragon, Jaime A ; Khan, Aziz ; van der Lee, Robin ; Zhang, Xi ; Richmond, Phillip A ; Modi, Bhavi P ; Correard, Solenne ; Gheorghe, Marius ; Baranašić, Damir ; Santana-Garcia, Walter ; Tan, Ge ; Chèneby, Jeanne ; Ballester, Benoit ; Parcy, François ; Sandelin, Albin ; Lenhard, Boris ; Wasserman, Wyeth W ; Mathelier, AnthonyNucleic acids research, 2020-01, Vol.48 (D1), p.D87-D92 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencingKeeling, Patrick J ; Burki, Fabien ; Wilcox, Heather M ; Allam, Bassem ; Allen, Eric E ; Amaral-Zettler, Linda A ; Armbrust, E Virginia ; Archibald, John M ; Bharti, Arvind K ; Bell, Callum J ; Beszteri, Bank ; Bidle, Kay D ; Cameron, Connor T ; Campbell, Lisa ; Caron, David A ; Cattolico, Rose Ann ; Collier, Jackie L ; Coyne, Kathryn ; Davy, Simon K ; Deschamps, Phillipe ; Dyhrman, Sonya T ; Edvardsen, Bente ; Gates, Ruth D ; Gobler, Christopher J ; Greenwood, Spencer J ; Guida, Stephanie M ; Jacobi, Jennifer L ; Jakobsen, Kjetill S ; James, Erick R ; Jenkins, Bethany ; John, Uwe ; Johnson, Matthew D ; Juhl, Andrew R ; Kamp, Anja ; Katz, Laura A ; Kiene, Ronald ; Kudryavtsev, Alexander ; Leander, Brian S ; Lin, Senjie ; Lovejoy, Connie ; Lynn, Denis ; Marchetti, Adrian ; McManus, George ; Nedelcu, Aurora M ; Menden-Deuer, Susanne ; Miceli, Cristina ; Mock, Thomas ; Montresor, Marina ; Moran, Mary Ann ; Murray, Shauna ; Nadathur, Govind ; Nagai, Satoshi ; Ngam, Peter B ; Palenik, Brian ; Pawlowski, Jan ; Petroni, Giulio ; Piganeau, Gwenael ; Posewitz, Matthew C ; Rengefors, Karin ; Romano, Giovanna ; Rumpho, Mary E ; Rynearson, Tatiana ; Schilling, Kelly B ; Schroeder, Declan C ; Simpson, Alastair G B ; Slamovits, Claudio H ; Smith, David R ; Smith, G Jason ; Smith, Sarah R ; Sosik, Heidi M ; Stief, Peter ; Theriot, Edward ; Twary, Scott N ; Umale, Pooja E ; Vaulot, Daniel ; Wawrik, Boris ; Wheeler, Glen L ; Wilson, William H ; Xu, Yan ; Zingone, Adriana ; Worden, Alexandra Z Roberts, Roland G.PLoS Biology, 2014-06, Vol.12 (6), p.e1001889 [Periódico revisado por pares]United States: Public Library of ScienceTexto completo disponível |
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Material Type: Artigo
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The evolution and changing ecology of the African hominid oral microbiomeFellows Yates, James A ; Velsko, Irina M ; Aron, Franziska ; Posth, Cosimo ; Hofman, Courtney A ; Austin, Rita M ; Parker, Cody E ; Mann, Allison E ; Nägele, Kathrin ; Arthur, Kathryn Weedman ; Arthur, John W ; Bauer, Catherine C ; Crevecoeur, Isabelle ; Cupillard, Christophe ; Curtis, Matthew C ; Dalén, Love ; Díaz-Zorita Bonilla, Marta ; Díez Fernández-Lomana, J Carlos ; Drucker, Dorothée G ; Escribano Escrivá, Elena ; Francken, Michael ; Gibbon, Victoria E ; González Morales, Manuel R ; Grande Mateu, Ana ; Harvati, Katerina ; Henry, Amanda G ; Humphrey, Louise ; Menéndez, Mario ; Mihailović, Dušan ; Peresani, Marco ; Rodríguez Moroder, Sofía ; Roksandic, Mirjana ; Rougier, Hélène ; Sázelová, Sandra ; Stock, Jay T ; Straus, Lawrence Guy ; Svoboda, Jiří ; Teßmann, Barbara ; Walker, Michael J ; Power, Robert C ; Lewis, Cecil M ; Sankaranarayanan, Krithivasan ; Guschanski, Katerina ; Wrangham, Richard W ; Dewhirst, Floyd E ; Salazar-García, Domingo C ; Krause, Johannes ; Herbig, Alexander ; Warinner, ChristinaProceedings of the National Academy of Sciences - PNAS, 2021-05, Vol.118 (20), p.1 [Periódico revisado por pares]United States: National Academy of SciencesTexto completo disponível |
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Material Type: Artigo
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Antibiotic resistance: turning evolutionary principles into clinical realityAndersson, Dan I ; Balaban, Nathalie Q ; Baquero, Fernando ; Courvalin, Patrice ; Glaser, Philippe ; Gophna, Uri ; Kishony, Roy ; Molin, Søren ; Tønjum, ToneFEMS microbiology reviews, 2020-03, Vol.44 (2), p.171-188 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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Dissemination of cephalosporin resistance genes between Escherichia coli strains from farm animals and humans by specific plasmid lineagesde Been, Mark ; Lanza, Val F ; de Toro, María ; Scharringa, Jelle ; Dohmen, Wietske ; Du, Yu ; Hu, Juan ; Lei, Ying ; Li, Ning ; Tooming-Klunderud, Ave ; Heederik, Dick J J ; Fluit, Ad C ; Bonten, Marc J M ; Willems, Rob J L ; de la Cruz, Fernando ; van Schaik, Willem Richardson, Paul M.PLoS genetics, 2014-12, Vol.10 (12), p.e1004776-e1004776 [Periódico revisado por pares]United States: Public Library of Science (PLoS)Texto completo disponível |
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Material Type: Artigo
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Metabolic enzyme cost explains variable trade-offs between microbial growth rate and yieldWortel, Meike T ; Noor, Elad ; Ferris, Michael ; Bruggeman, Frank J ; Liebermeister, Wolfram Maranas, Costas D.PLoS computational biology, 2018-02, Vol.14 (2), p.e1006010-e1006010 [Periódico revisado por pares]United States: Public Library of ScienceTexto completo disponível |
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Material Type: Artigo
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The UNITE database for molecular identification and taxonomic communication of fungi and other eukaryotes: sequences, taxa and classifications reconsideredAbarenkov, Kessy ; Nilsson, R Henrik ; Larsson, Karl-Henrik ; Taylor, Andy F S ; May, Tom W ; Frøslev, Tobias Guldberg ; Pawlowska, Julia ; Lindahl, Björn ; Põldmaa, Kadri ; Truong, Camille ; Vu, Duong ; Hosoya, Tsuyoshi ; Niskanen, Tuula ; Piirmann, Timo ; Ivanov, Filipp ; Zirk, Allan ; Peterson, Marko ; Cheeke, Tanya E ; Ishigami, Yui ; Jansson, Arnold Tobias ; Jeppesen, Thomas Stjernegaard ; Kristiansson, Erik ; Mikryukov, Vladimir ; Miller, Joseph T ; Oono, Ryoko ; Ossandon, Francisco J ; Paupério, Joana ; Saar, Irja ; Schigel, Dmitry ; Suija, Ave ; Tedersoo, Leho ; Kõljalg, UrmasNucleic acids research, 2024, Vol.52 (D1), p.D791-D797 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |