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BUSCO Applications from Quality Assessments to Gene Prediction and PhylogenomicsWaterhouse, Robert M ; Seppey, Mathieu ; Simão, Felipe A ; Manni, Mosè ; Ioannidis, Panagiotis ; Klioutchnikov, Guennadi ; Kriventseva, Evgenia V ; Zdobnov, Evgeny MMolecular biology and evolution, 2018-03, Vol.35 (3), p.543-548 [Periódico revisado por pares]United States: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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OrthoDB v9.1: cataloging evolutionary and functional annotations for animal, fungal, plant, archaeal, bacterial and viral orthologsZdobnov, Evgeny M ; Tegenfeldt, Fredrik ; Kuznetsov, Dmitry ; Waterhouse, Robert M ; Simão, Felipe A ; Ioannidis, Panagiotis ; Seppey, Mathieu ; Loetscher, Alexis ; Kriventseva, Evgenia VNucleic acids research, 2017-01, Vol.45 (D1), p.D744-D749 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologsWaterhouse, Robert M ; Tegenfeldt, Fredrik ; Li, Jia ; Zdobnov, Evgeny M ; Kriventseva, Evgenia VNucleic acids research, 2013-01, Vol.41 (Database issue), p.D358-D365 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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CrowdGO: Machine learning and semantic similarity guided consensus Gene Ontology annotationReijnders, Maarten J M F ; Waterhouse, Robert M Fetrow, Jacquelyn S.PLoS computational biology, 2022-05, Vol.18 (5), p.e1010075-e1010075 [Periódico revisado por pares]United States: Public Library of ScienceTexto completo disponível |
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Material Type: Artigo
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OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free softwareKriventseva, Evgenia V ; Tegenfeldt, Fredrik ; Petty, Tom J ; Waterhouse, Robert M ; Simão, Felipe A ; Pozdnyakov, Igor A ; Ioannidis, Panagiotis ; Zdobnov, Evgeny MNucleic acids research, 2015-01, Vol.43 (Database issue), p.D250-D256 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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Extensive introgression in a malaria vector species complex revealed by phylogenomicsFontaine, Michael C. ; Pease, James B. ; Steele, Aaron ; Waterhouse, Robert M. ; Neafsey, Daniel E. ; Sharakhov, Igor V. ; Jiang, Xiaofang ; Hall, Andrew B. ; Catteruccia, Flaminia ; Kakani, Evdoxia ; Mitchell, Sara N. ; Wu, Yi-Chieh ; Smith, Hilary A. ; Love, R. Rebecca ; Lawniczak, Mara K. ; Slotman, Michel A. ; Emrich, Scott J. ; Hahn, Matthew W. ; Besansky, Nora J.Science (American Association for the Advancement of Science), 2015-01, Vol.347 (6217), p.42-42 [Periódico revisado por pares]Washington: American Association for the Advancement of ScienceTexto completo disponível |
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Material Type: Artigo
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Evolutionary Dynamics of Abundant Stop Codon ReadthroughJungreis, Irwin ; Chan, Clara S ; Waterhouse, Robert M ; Fields, Gabriel ; Lin, Michael F ; Kellis, ManolisMolecular biology and evolution, 2016-12, Vol.33 (12), p.3108-3132 [Periódico revisado por pares]United States: Oxford University PressTexto completo disponível |
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Material Type: Artigo
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Anopheles mosquitoes reveal new principles of 3D genome organization in insectsLukyanchikova, Varvara ; Nuriddinov, Miroslav ; Belokopytova, Polina ; Taskina, Alena ; Liang, Jiangtao ; Reijnders, Maarten J M F ; Ruzzante, Livio ; Feron, Romain ; Waterhouse, Robert M ; Wu, Yang ; Mao, Chunhong ; Tu, Zhijian ; Sharakhov, Igor V ; Fishman, VeniaminNature communications, 2022-04, Vol.13 (1), p.1960-1960, Article 1960 [Periódico revisado por pares]England: Nature Publishing GroupTexto completo disponível |
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Material Type: Artigo
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Mycobacterium abscessus resists the innate cellular response by surviving cell lysis of infected phagocytesTouré, Hamadoun ; Galindo, Lee Ann ; Lagune, Marion ; Glatigny, Simon ; Waterhouse, Robert M ; Guénal, Isabelle ; Herrmann, Jean-Louis ; Girard-Misguich, Fabienne ; Szuplewski, Sébastien Boshoff, Helena IngridPLoS pathogens, 2023-03, Vol.19 (3), p.e1011257-e1011257 [Periódico revisado por pares]United States: Public Library of ScienceTexto completo disponível |
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Material Type: Artigo
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OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011Waterhouse, Robert M ; Zdobnov, Evgeny M ; Tegenfeldt, Fredrik ; Li, Jia ; Kriventseva, Evgenia VNucleic acids research, 2011-01, Vol.39 (Database issue), p.D283-D288 [Periódico revisado por pares]England: Oxford University PressTexto completo disponível |