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The Epigenomic Landscape of Prokaryotes
The Epigenomic Landscape of Prokaryotes
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The Epigenomic Landscape of Prokaryotes

Blow, Matthew J ; Clark, Tyson A ; Daum, Chris G ; Deutschbauer, Adam M ; Fomenkov, Alexey ; Fries, Roxanne ; Froula, Jeff ; Kang, Dongwan D ; Malmstrom, Rex R ; Morgan, Richard D ; Posfai, Janos ; Singh, Kanwar ; Visel, Axel ; Wetmore, Kelly ; Zhao, Zhiying ; Rubin, Edward M ; Korlach, Jonas ; Pennacchio, Len A ; Roberts, Richard J Fang, Gang

PLoS genetics, 2016-02, Vol.12 (2), p.e1005854-e1005854 [Periódico revisado por pares]

United States: Public Library of Science

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A comparative genomics study of 23 Aspergillus species from section Flavi
A comparative genomics study of 23 Aspergillus species from section Flavi
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A comparative genomics study of 23 Aspergillus species from section Flavi

Kjærbølling, Inge ; Vesth, Tammi ; Frisvad, Jens C ; Nybo, Jane L ; Theobald, Sebastian ; Kildgaard, Sara ; Petersen, Thomas Isbrandt ; Kuo, Alan ; Sato, Atsushi ; Lyhne, Ellen K ; Kogle, Martin E ; Wiebenga, Ad ; Kun, Roland S ; Lubbers, Ronnie J M ; Mäkelä, Miia R ; Barry, Kerrie ; Chovatia, Mansi ; Clum, Alicia ; Daum, Chris ; Haridas, Sajeet ; He, Guifen ; LaButti, Kurt ; Lipzen, Anna ; Mondo, Stephen ; Pangilinan, Jasmyn ; Riley, Robert ; Salamov, Asaf ; Simmons, Blake A ; Magnuson, Jon K ; Henrissat, Bernard ; Mortensen, Uffe H ; Larsen, Thomas O ; de Vries, Ronald P ; Grigoriev, Igor V ; Machida, Masayuki ; Baker, Scott E ; Andersen, Mikael R

Nature communications, 2020-02, Vol.11 (1), p.1106-1106, Article 1106 [Periódico revisado por pares]

England: Nature Publishing Group

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3
Persistence and plasticity in bacterial gene regulation
Persistence and plasticity in bacterial gene regulation
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Persistence and plasticity in bacterial gene regulation

Baumgart, Leo A ; Lee, Ji Eun ; Salamov, Asaf ; Dilworth, David J ; Na, Hyunsoo ; Mingay, Matthew ; Blow, Matthew J ; Zhang, Yu ; Yoshinaga, Yuko ; Daum, Chris G ; O'Malley, Ronan C

Nature methods, 2021-12, Vol.18 (12), p.1499-1505 [Periódico revisado por pares]

United States: Nature Publishing Group

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4
A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism
A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism
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A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism

Cooper, Elizabeth A ; Brenton, Zachary W ; Flinn, Barry S ; Jenkins, Jerry ; Shu, Shengqiang ; Flowers, Dave ; Luo, Feng ; Wang, Yunsheng ; Xia, Penny ; Barry, Kerrie ; Daum, Chris ; Lipzen, Anna ; Yoshinaga, Yuko ; Schmutz, Jeremy ; Saski, Christopher ; Vermerris, Wilfred ; Kresovich, Stephen

BMC genomics, 2019-05, Vol.20 (1), p.420-13, Article 420 [Periódico revisado por pares]

England: BioMed Central Ltd

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5
The genomic landscape of molecular responses to natural drought stress in Panicum hallii
The genomic landscape of molecular responses to natural drought stress in Panicum hallii
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The genomic landscape of molecular responses to natural drought stress in Panicum hallii

Lovell, John T ; Jenkins, Jerry ; Lowry, David B ; Mamidi, Sujan ; Sreedasyam, Avinash ; Weng, Xiaoyu ; Barry, Kerrie ; Bonnette, Jason ; Campitelli, Brandon ; Daum, Chris ; Gordon, Sean P ; Gould, Billie A ; Khasanova, Albina ; Lipzen, Anna ; MacQueen, Alice ; Palacio-Mejía, Juan Diego ; Plott, Christopher ; Shakirov, Eugene V ; Shu, Shengqiang ; Yoshinaga, Yuko ; Zane, Matt ; Kudrna, Dave ; Talag, Jason D ; Rokhsar, Daniel ; Grimwood, Jane ; Schmutz, Jeremy ; Juenger, Thomas E

Nature communications, 2018-12, Vol.9 (1), p.5213-10, Article 5213 [Periódico revisado por pares]

England: Nature Publishing Group

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6
The obligate alkalophilic soda‐lake fungus Sodiomyces alkalinus has shifted to a protein diet
The obligate alkalophilic soda‐lake fungus Sodiomyces alkalinus has shifted to a protein diet
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The obligate alkalophilic soda‐lake fungus Sodiomyces alkalinus has shifted to a protein diet

Grum‐Grzhimaylo, Alexey A. ; Falkoski, Daniel L. ; Heuvel, Joost ; Valero‐Jiménez, Claudio A. ; Min, Byoungnam ; Choi, In‐Geol ; Lipzen, Anna ; Daum, Chris G. ; Aanen, Duur K. ; Tsang, Adrian ; Henrissat, Bernard ; Bilanenko, Elena N. ; Vries, Ronald P. ; Kan, Jan A. L. ; Grigoriev, Igor V. ; Debets, Alfons J. M.

Molecular ecology, 2018-12, Vol.27 (23), p.4808-4819 [Periódico revisado por pares]

England: Blackwell Publishing Ltd

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7
High‐throughput identification of novel heat tolerance genes via genome‐wide pooled mutant screens in the model green alga Chlamydomonas reinhardtii
High‐throughput identification of novel heat tolerance genes via genome‐wide pooled mutant screens in the model green alga Chlamydomonas reinhardtii
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High‐throughput identification of novel heat tolerance genes via genome‐wide pooled mutant screens in the model green alga Chlamydomonas reinhardtii

Mattoon, Erin M. ; McHargue, William E. ; Bailey, Catherine E. ; Zhang, Ningning ; Chen, Chen ; Eckhardt, James ; Daum, Chris G. ; Zane, Matt ; Pennacchio, Christa ; Schmutz, Jeremy ; O'Malley, Ronan C. ; Cheng, Jianlin ; Zhang, Ru

Plant, cell and environment, 2023-03, Vol.46 (3), p.865-888 [Periódico revisado por pares]

United States: Wiley Subscription Services, Inc

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8
Evaluation of co-circulating pathogens and microbiome from COVID-19 infections
Evaluation of co-circulating pathogens and microbiome from COVID-19 infections
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Evaluation of co-circulating pathogens and microbiome from COVID-19 infections

Thissen, James B ; Morrison, Michael D ; Mulakken, Nisha ; Nelson, William C ; Daum, Chris ; Messenger, Sharon ; Wadford, Debra A ; Jaing, Crystal Onwuamah, Chika Kingsley

PloS one, 2022-12, Vol.17 (12), p.e0278543-e0278543 [Periódico revisado por pares]

United States: Public Library of Science

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9
Evaluation of co-circulating pathogens and microbiome from COVID-19 infections
Evaluation of co-circulating pathogens and microbiome from COVID-19 infections
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Evaluation of co-circulating pathogens and microbiome from COVID-19 infections

Thissen, James B. ; Morrison, Michael D. ; Mulakken, Nisha ; Nelson, William C. ; Daum, Chris ; Messenger, Sharon ; Wadford, Debra A. ; Jaing, Crystal ; Onwuamah, ed., Chika Kingsley

PloS one, 2022-12, Vol.17 (12), p.e0278543 [Periódico revisado por pares]

United States: Public Library of Science (PLoS)

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10
Genome-wide associations with flowering time in switchgrass using exome-capture sequencing data
Genome-wide associations with flowering time in switchgrass using exome-capture sequencing data
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Genome-wide associations with flowering time in switchgrass using exome-capture sequencing data

Grabowski, Paul P. ; Evans, Joseph ; Daum, Chris ; Deshpande, Shweta ; Barry, Kerrie W. ; Kennedy, Megan ; Ramstein, Guillaume ; Kaeppler, Shawn M. ; Buell, C. Robin ; Jiang, Yiwei ; Casler, Michael D.

The New phytologist, 2017-01, Vol.213 (1), p.154-169 [Periódico revisado por pares]

England: New Phytologist Trust

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