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The Weighted Suffix Tree: An Efficient Data Structure for Handling Molecular Weighted Sequences and its Applications
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Artigo
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The Weighted Suffix Tree: An Efficient Data Structure for Handling Molecular Weighted Sequences and its Applications

Iliopoulos, Costas S ; Makris, Christos ; Panagis, Yannis ; Perdikuri, Katerina ; Theodoridis, Evangelos ; Tsakalidis, Athanasios

Fundamenta informaticae, 2006, Vol.71 (2-3), p.259-277 [Periódico revisado por pares]

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2
Overlapping repetitions in weighted sequence
Material Type:
Ata de Congresso
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Overlapping repetitions in weighted sequence

Alatabbi, Ali ; Crochemore, Maxime ; Iliopoulos, Costas S. ; Okanlawon, Tewogboye A.

Proceedings of the CUBE International Information Technology Conference, 2012, p.435-440

New York, NY, USA: ACM

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3
Efficient Algorithms for Handling Molecular Weighted Sequences
Material Type:
Capítulo de Livro
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Efficient Algorithms for Handling Molecular Weighted Sequences

Iliopoulos, Costas S. ; Makris, Christos ; Panagis, Yannis ; Perdikuri, Katerina ; Theodoridis, Evangelos ; Tsakalidis, Athanasios

Exploring New Frontiers of Theoretical Informatics, p.265-278

Boston, MA: Springer US

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4
Condition‐dependent co‐regulation of genomic clusters of virulence factors in the grapevine trunk pathogen Neofusicoccum parvum
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Artigo
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Condition‐dependent co‐regulation of genomic clusters of virulence factors in the grapevine trunk pathogen Neofusicoccum parvum

Massonnet, Mélanie ; Morales‐Cruz, Abraham ; Figueroa‐Balderas, Rosa ; Lawrence, Daniel P. ; Baumgartner, Kendra ; Cantu, Dario

Molecular plant pathology, 2018-01, Vol.19 (1), p.21-34 [Periódico revisado por pares]

Oxford: John Wiley & Sons, Inc

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5
Prediction of Protein-Protein Interactions from Amino Acid Sequences Based on Continuous and Discrete Wavelet Transform Features
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Artigo
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Prediction of Protein-Protein Interactions from Amino Acid Sequences Based on Continuous and Discrete Wavelet Transform Features

Wang, Tao ; Li, Liping ; Huang, Yu-An ; Zhang, Hui ; Ma, Yahong ; Zhou, Xing

Molecules (Basel, Switzerland), 2018-04, Vol.23 (4), p.823 [Periódico revisado por pares]

Switzerland: MDPI AG

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On the relationship between residue structural environment and sequence conservation in proteins
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Artigo
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On the relationship between residue structural environment and sequence conservation in proteins

Liu, Jen‐Wei ; Lin, Jau‐Ji ; Cheng, Chih‐Wen ; Lin, Yu‐Feng ; Hwang, Jenn‐Kang ; Huang, Tsun‐Tsao

Proteins, structure, function, and bioinformatics, 2017-09, Vol.85 (9), p.1713-1723 [Periódico revisado por pares]

United States: Wiley Subscription Services, Inc

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7
A Protein Co-Conservation Network Model Characterizes Mutation Effects on SARS-CoV-2 Spike Protein
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Artigo
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A Protein Co-Conservation Network Model Characterizes Mutation Effects on SARS-CoV-2 Spike Protein

Zeng, Lianjie ; Lu, Yitan ; Yan, Wenying ; Yang, Yang

International journal of molecular sciences, 2023-02, Vol.24 (4), p.3255 [Periódico revisado por pares]

Switzerland: MDPI AG

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8
GenHap: a novel computational method based on genetic algorithms for haplotype assembly
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Artigo
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GenHap: a novel computational method based on genetic algorithms for haplotype assembly

Tangherloni, Andrea ; Spolaor, Simone ; Rundo, Leonardo ; Nobile, Marco S ; Cazzaniga, Paolo ; Mauri, Giancarlo ; Liò, Pietro ; Merelli, Ivan ; Besozzi, Daniela

BMC bioinformatics, 2019-04, Vol.20 (Suppl 4), p.172-172, Article 172 [Periódico revisado por pares]

England: BioMed Central Ltd

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9
Genome-wide identification and characterization of long non-coding RNAs involved in flag leaf senescence of rice
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Artigo
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Genome-wide identification and characterization of long non-coding RNAs involved in flag leaf senescence of rice

Huang, Xiaoping ; Zhang, Hongyu ; Wang, Qiang ; Guo, Rong ; Wei, Lingxia ; Song, Haiyan ; Kuang, Weigang ; Liao, Jianglin ; Huang, Yingjin ; Wang, Zhaohai

Plant molecular biology, 2021-04, Vol.105 (6), p.655-684 [Periódico revisado por pares]

Dordrecht: Springer Netherlands

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10
The conservation profile of a protein bears the imprint of the molecule that is evolutionarily coupled to the protein
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Artigo
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The conservation profile of a protein bears the imprint of the molecule that is evolutionarily coupled to the protein

Huang, Yu-Wen ; Chang, Chih-Min ; Lee, Chi-Wen ; Hwang, Jenn-Kang

Proteins, structure, function, and bioinformatics, 2015-08, Vol.83 (8), p.1407-1413 [Periódico revisado por pares]

United States: Blackwell Publishing Ltd

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