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1
A genetically linked pair of NLR immune receptors shows contrasting patterns of evolution
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Artigo
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A genetically linked pair of NLR immune receptors shows contrasting patterns of evolution

Shimizu, Motoki ; Hirabuchi, Akiko ; Sugihara, Yu ; Abe, Akira ; Takeda, Takumi ; Kobayashi, Michie ; Hiraka, Yukie ; Kanzaki, Eiko ; Oikawa, Kaori ; Saitoh, Hiromasa ; Langner, Thorsten ; Banfield, Mark J. ; Kamoun, Sophien ; Terauchi, Ryohei

Proceedings of the National Academy of Sciences - PNAS, 2022-07, Vol.119 (27), p.1-e2116896119 [Periódico revisado por pares]

Washington: National Academy of Sciences

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2
High-performance pipeline for MutMap and QTL-seq
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Artigo
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High-performance pipeline for MutMap and QTL-seq

Sugihara, Yu ; Young, Lester ; Yaegashi, Hiroki ; Natsume, Satoshi ; Shea, Daniel J ; Takagi, Hiroki ; Booker, Helen ; Innan, Hideki ; Terauchi, Ryohei ; Abe, Akira

PeerJ (San Francisco, CA), 2022-03, Vol.10, p.e13170-e13170, Article e13170 [Periódico revisado por pares]

United States: PeerJ. Ltd

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3
Rice apoplastic CBM1-interacting protein counters blast pathogen invasion by binding conserved carbohydrate binding module 1 motif of fungal proteins
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Artigo
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Rice apoplastic CBM1-interacting protein counters blast pathogen invasion by binding conserved carbohydrate binding module 1 motif of fungal proteins

Takeda, Takumi ; Takahashi, Machiko ; Shimizu, Motoki ; Sugihara, Yu ; Yamashita, Tetsuro ; Saitoh, Hiromasa ; Fujisaki, Koki ; Ishikawa, Kazuya ; Utsushi, Hiroe ; Kanzaki, Eiko ; Sakamoto, Yuichi ; Abe, Akira ; Terauchi, Ryohei Wang, Yuanchao

PLoS pathogens, 2022-09, Vol.18 (9), p.e1010792-e1010792 [Periódico revisado por pares]

San Francisco: Public Library of Science

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4
Disentangling the complex gene interaction networks between rice and the blast fungus identifies a new pathogen effector
Material Type:
Artigo
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Disentangling the complex gene interaction networks between rice and the blast fungus identifies a new pathogen effector

Sugihara, Yu ; Abe, Yoshiko ; Takagi, Hiroki ; Abe, Akira ; Shimizu, Motoki ; Ito, Kazue ; Kanzaki, Eiko ; Oikawa, Kaori ; Kourelis, Jiorgos ; Langner, Thorsten ; Win, Joe ; Białas, Aleksandra ; Lüdke, Daniel ; Contreras, Mauricio P ; Chuma, Izumi ; Saitoh, Hiromasa ; Kobayashi, Michie ; Zheng, Shuan ; Tosa, Yukio ; Banfield, Mark J ; Kamoun, Sophien ; Terauchi, Ryohei ; Fujisaki, Koki Mitchell, Aaron P.

PLoS Biology, 2023-01, Vol.21 (1), p.e3001945-e3001945 [Periódico revisado por pares]

United States: Public Library of Science

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5
Phylogenomic analysis in Latilactobacillus sakei by using polymorphisms detected by next-generation sequencing
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Artigo
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Phylogenomic analysis in Latilactobacillus sakei by using polymorphisms detected by next-generation sequencing

NISHIYAMA, Chisato ; SEKIGUCHI, Suguru ; SUGIHARA, Yu ; NISHIKAWA, Minami ; MAKITA, Natsu ; SEGAWA, Tenta ; TERASAKI, Momoka ; TAKAGI, Hiroki ; KOYANAGI, Takashi

Bioscience of Microbiota, Food and Health, 2023, pp.2022-017

Japan: BMFH Press

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6
Sat-BSA: an NGS-based method using local de novo assembly of long reads for rapid identification of genomic structural variations associated with agronomic traits
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Artigo
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Sat-BSA: an NGS-based method using local de novo assembly of long reads for rapid identification of genomic structural variations associated with agronomic traits

Segawa, Tenta ; Nishiyama, Chisato ; Tamiru-Oli, Muluneh ; Sugihara, Yu ; Abe, Akira ; Sone, Hinako ; Itoh, Noriaki ; Asukai, Mayu ; Uemura, Aiko ; Oikawa, Kaori ; Utsushi, Hiroe ; Ikegami-Katayama, Ayako ; Imamura, Tomohiro ; Mori, Masashi ; Terauchi, Ryohei ; Takagi, Hiroki

Breeding Science, 2021, Vol.71(3), pp.299-312 [Periódico revisado por pares]

Tokyo: Japanese Society of Breeding

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7
NGS-based genome wide association study helps to develop co-dominant marker for the physical map-based locus of PFRU controlling flowering in cultivated octoploid strawberry
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Artigo
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NGS-based genome wide association study helps to develop co-dominant marker for the physical map-based locus of PFRU controlling flowering in cultivated octoploid strawberry

Saiga, Sorachi ; Tada, Maiko ; Segawa, Tenta ; Sugihara, Yu ; Nishikawa, Minami ; Makita, Natsu ; Sakamoto, Minami ; Tanaka, Kanako ; Wada, Takuya ; Takagi, Hiroki

Euphytica, 2023, Vol.219 (1), p.6, Article 6 [Periódico revisado por pares]

Dordrecht: Springer Netherlands

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8
Rice apoplastic CBM1-interacting protein counters blast pathogen invasion by binding conserved carbohydrate binding module 1 motif of fungal proteins
Material Type:
Artigo
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Rice apoplastic CBM1-interacting protein counters blast pathogen invasion by binding conserved carbohydrate binding module 1 motif of fungal proteins

Takumi Takeda ; Machiko Takahashi ; Motoki Shimizu ; Yu Sugihara ; Tetsuro Yamashita ; Hiromasa Saitoh ; Koki Fujisaki ; Kazuya Ishikawa ; Hiroe Utsushi ; Eiko Kanzaki ; Yuichi Sakamoto ; Akira Abe ; Ryohei Terauchi

PLoS pathogens, 2022-09, Vol.18 (9), p.e1010792 [Periódico revisado por pares]

Public Library of Science (PLoS)

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9
Genome analyses reveal the hybrid origin of the staple crop white Guinea yam (Dioscorea rotundata)
Material Type:
Artigo
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Genome analyses reveal the hybrid origin of the staple crop white Guinea yam (Dioscorea rotundata)

Sugihara, Yu ; Darkwa, Kwabena ; Yaegashi, Hiroki ; Natsume, Satoshi ; Shimizu, Motoki ; Abe, Akira ; Hirabuchi, Akiko ; Ito, Kazue ; Oikawa, Kaori ; Tamiru-Oli, Muluneh ; Ohta, Atsushi ; Matsumoto, Ryo ; Agre, Paterne ; De Koeyer, David ; Pachakkil, Babil ; Yamanaka, Shinsuke ; Muranaka, Satoru ; Takagi, Hiroko ; White, Ben ; Asiedu, Robert ; Innan, Hideki ; Asfaw, Asrat ; Adebola, Patrick ; Terauchi, Ryohei

Proceedings of the National Academy of Sciences - PNAS, 2020-12, Vol.117 (50), p.31987-31992 [Periódico revisado por pares]

United States: National Academy of Sciences

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10
Disentangling the complex gene interaction networks between rice and the blast fungus identifies a new pathogen effector
Material Type:
Artigo
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Disentangling the complex gene interaction networks between rice and the blast fungus identifies a new pathogen effector

Yu Sugihara ; Yoshiko Abe ; Hiroki Takagi ; Akira Abe ; Motoki Shimizu ; Kazue Ito ; Eiko Kanzaki ; Kaori Oikawa ; Jiorgos Kourelis ; Thorsten Langner ; Joe Win ; Aleksandra Białas ; Daniel Lüdke ; Mauricio P Contreras ; Izumi Chuma ; Hiromasa Saitoh ; Michie Kobayashi ; Shuan Zheng ; Yukio Tosa ; Mark J Banfield ; Sophien Kamoun ; Ryohei Terauchi ; Koki Fujisaki

PLoS biology, 2023-01, Vol.21 (1), p.e3001945 [Periódico revisado por pares]

Public Library of Science (PLoS)

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