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1
128 staRgate: a flexible density-based automated gating pipeline for complex high-dimensional flow cytometry data
128 staRgate: a flexible density-based automated gating pipeline for complex high-dimensional flow cytometry data
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128 staRgate: a flexible density-based automated gating pipeline for complex high-dimensional flow cytometry data

Lee, Jasme ; Adamow, Matthew ; Maher, Colleen ; Peng, Xiyu ; Wong, Phillip ; Ehrich, Fiona ; Callahan, Margaret K ; Shen, Ronglai ; Panageas, Katherine S

Journal for immunotherapy of cancer, 2023-11, Vol.11 (Suppl 1), p.A144-A145 [Periódico revisado por pares]

London: BMJ Publishing Group Ltd

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2
1303 Spatial topic modeling of tumor microenvironment with multiplexed imaging
1303 Spatial topic modeling of tumor microenvironment with multiplexed imaging
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1303 Spatial topic modeling of tumor microenvironment with multiplexed imaging

Peng, Xiyu ; Smithy, James W ; Aleynick, Nathaniel ; Zhuang, Mingqiang ; Li, Yanyun ; Lee, Jasme ; Moy, Andrea P ; Maher, Colleen ; Ehrich, Fiona ; Hollmann, Travis ; Callahan, Margaret K ; Panageas, Katherine S ; Shen, Ronglai

Journal for immunotherapy of cancer, 2023-11, Vol.11 (Suppl 1), p.A1448-A1448 [Periódico revisado por pares]

London: BMJ Publishing Group Ltd

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3
135 Integration of T-cell activation and tumor mutation burden predicts anti-PD-1 response
135 Integration of T-cell activation and tumor mutation burden predicts anti-PD-1 response
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135 Integration of T-cell activation and tumor mutation burden predicts anti-PD-1 response

Ehrich, Fiona ; Adamow, Matthew ; Maher, Colleen ; Lee, Jasme ; Peng, Xiyu ; Smithy, James W ; Funt, Samuel A ; Postow, Michael ; Keegan, Niamh ; Panageas, Katherine S ; Shen, Ronglai ; Callahan, Margaret K

Journal for immunotherapy of cancer, 2023-11, Vol.11 (Suppl 1), p.A155-A155 [Periódico revisado por pares]

London: BMJ Publishing Group Ltd

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4
1436: Comprehensive Assessment of TMPRSS2 and ETS Family Gene Aberrations in Clinically Localized Prostate Cancer
1436: Comprehensive Assessment of TMPRSS2 and ETS Family Gene Aberrations in Clinically Localized Prostate Cancer
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1436: Comprehensive Assessment of TMPRSS2 and ETS Family Gene Aberrations in Clinically Localized Prostate Cancer

Mehra, Rohit ; Tomlins, Scott A. ; Shen, Ronglai ; Nadeem, Owais ; Wang, Lucy ; Wei, John T. ; Pienta, Kenneth J. ; Ghosh, Debashis ; Rubin, Mark A. ; Chinnaiyan, Arul M. ; Shah, Rajal B.

The Journal of urology, 2007-04, Vol.177 (4), p.474-474 [Periódico revisado por pares]

Elsevier Inc

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5
221 Digital assessment of stromal B cell aggregates as a biomarker of response to immune checkpoint inhibition in unresectable melanoma
221 Digital assessment of stromal B cell aggregates as a biomarker of response to immune checkpoint inhibition in unresectable melanoma
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221 Digital assessment of stromal B cell aggregates as a biomarker of response to immune checkpoint inhibition in unresectable melanoma

Smithy, James W ; Peng, Xiyu ; Moy, Andrea P ; Aleynick, Nathaniel ; Zhuang, Mingqiang ; Li, Yanyun ; Maher, Colleen ; Lee, Jasme ; Ehrich, Fiona ; Panageas, Katherine S ; Shen, Ronglai ; Hollmann, Travis ; Callahan, Margaret K

Journal for immunotherapy of cancer, 2023-11, Vol.11 (Suppl 1), p.A252-A252 [Periódico revisado por pares]

London: BMJ Publishing Group Ltd

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6
Abstract 1202: Signatures of selection for biallelic inactivation in tumor suppressor genes across cancer types
Abstract 1202: Signatures of selection for biallelic inactivation in tumor suppressor genes across cancer types
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Abstract 1202: Signatures of selection for biallelic inactivation in tumor suppressor genes across cancer types

Zucker, Mark R. ; Perry, Maria A. ; Elkrief, Arielle ; Safonov, Anton ; Thummalapalli, Rohit ; Gould, Samuel I. ; Chakravarty, Debyani ; Brannon, Rose ; Ladanyi, Marc ; Razavi, Pedram ; Donoghue, Mark T. ; Murciano-Goroff, Yonina R. ; Sánchez-Rivera, Francisco J. ; Chen, Yuan ; Shen, Ronglai ; Chandarlapaty, Sarat ; Solit, David B. ; Schultz, Nikolaus ; Berger, Michael F. ; Schoenfeld, Adam J. ; Chang, Jason ; Reznik, Ed ; Bandlamudi, Chaitanya

Cancer research (Chicago, Ill.), 2024-03, Vol.84 (6_Supplement), p.1202-1202 [Periódico revisado por pares]

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7
Abstract 1252: AI-derived predictions improve identification of real-world cancer driver mutations
Abstract 1252: AI-derived predictions improve identification of real-world cancer driver mutations
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Abstract 1252: AI-derived predictions improve identification of real-world cancer driver mutations

Tran, Thinh N. ; Fong, Chris ; Pichotta, Karl ; Luthra, Anisha ; Shen, Ronglai ; Chen, Yuan ; Waters, Michele ; Kim, Susie ; Riely, Gregory ; Chakravarty, Debyani ; Schultz, Nikolaus ; Jee, Justin

Cancer research (Chicago, Ill.), 2024-03, Vol.84 (6_Supplement), p.1252-1252 [Periódico revisado por pares]

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8
Abstract 4284: Enhancing subclonal reconstruction algorithm for resolving complex tumor phylogenies from multi-sample tumor DNA sequencing
Abstract 4284: Enhancing subclonal reconstruction algorithm for resolving complex tumor phylogenies from multi-sample tumor DNA sequencing
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Abstract 4284: Enhancing subclonal reconstruction algorithm for resolving complex tumor phylogenies from multi-sample tumor DNA sequencing

Winata, Helena ; Knight, Daniel ; Patel, Juber A. ; Wang, Nicholas K. ; Selenica, Pier ; Eng, Stefan E. ; Kostrzewa, Caroline ; Arbet, Jaron ; Zhu, Yingjie ; Shen, Ronglai ; Reis-Filho, Jorge ; Razafi, Pedram ; Boutros, Paul C.

Cancer research (Chicago, Ill.), 2023-04, Vol.83 (7_Supplement), p.4284-4284 [Periódico revisado por pares]

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9
Abstract 5721: Automated annotation for large-scale clinicogenomic models of lung cancer treatment response and overall survival
Abstract 5721: Automated annotation for large-scale clinicogenomic models of lung cancer treatment response and overall survival
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Abstract 5721: Automated annotation for large-scale clinicogenomic models of lung cancer treatment response and overall survival

Jee, Justin ; Fong, Chris ; Pichotta, Karl ; Tran, Thinh ; Luthra, Anisha ; Altoe, Mirella ; Maron, Steven ; Shen, Ronglai ; Liu, Si-Yang ; Waters, Michele ; Kholodenko, Joseph ; Mastrogiacomo, Brooke ; Kim, Susie ; Brannon, A Rose ; Berger, Michael F. ; Martin, Axel ; Chang, Jason ; Safonov, Anton ; Reis-Filho, Jorge S. ; Schrag, Deborah ; Shah, Sohrab P. ; Razavi, Pedram ; Li, Bob T. ; Riely, Gregory J. ; Schultz, Nikolaus

Cancer research (Chicago, Ill.), 2023-04, Vol.83 (7_Supplement), p.5721-5721 [Periódico revisado por pares]

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10
Abstract 927: Genomic profiling of metastatic breast cancer identifies the Hippo pathway to be a key determinant of CDK4/6 inhibitor sensitivity
Abstract 927: Genomic profiling of metastatic breast cancer identifies the Hippo pathway to be a key determinant of CDK4/6 inhibitor sensitivity
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Abstract 927: Genomic profiling of metastatic breast cancer identifies the Hippo pathway to be a key determinant of CDK4/6 inhibitor sensitivity

Razavi, Pedram ; Li, Qing ; Li, Zhiqiang ; Brown, David N. ; Ping, Christina ; Shen, Ronglai ; Sanchez-Vega, Francisco ; Schultz, Nikolaus D. ; Baselga, Jose ; Scaltriti, Maurizio ; Reis-Filho, Jorge S. ; Chandarlapaty, Sarat

Cancer research (Chicago, Ill.), 2019-07, Vol.79 (13_Supplement), p.927-927 [Periódico revisado por pares]

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