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The EnteroBase user's guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversity
The EnteroBase user's guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversity
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The EnteroBase user's guide, with case studies on Salmonella transmissions, Yersinia pestis phylogeny, and Escherichia core genomic diversity

Zhou, Zhemin ; Alikhan, Nabil-Fareed ; Mohamed, Khaled ; Fan, Yulei ; Achtman, Mark

Genome research, 2020-01, Vol.30 (1), p.138-152 [Periódico revisado por pares]

United States: Cold Spring Harbor Laboratory Press

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2
Early Divergent Strains of Yersinia pestis in Eurasia 5,000 Years Ago
Early Divergent Strains of Yersinia pestis in Eurasia 5,000 Years Ago
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Early Divergent Strains of Yersinia pestis in Eurasia 5,000 Years Ago

Rasmussen, Simon ; Allentoft, Morten Erik ; Nielsen, Kasper ; Orlando, Ludovic ; Sikora, Martin ; Sjögren, Karl-Göran ; Pedersen, Anders Gorm ; Schubert, Mikkel ; Van Dam, Alex ; Kapel, Christian Moliin Outzen ; Nielsen, Henrik Bjørn ; Brunak, Søren ; Avetisyan, Pavel ; Epimakhov, Andrey ; Khalyapin, Mikhail Viktorovich ; Gnuni, Artak ; Kriiska, Aivar ; Lasak, Irena ; Metspalu, Mait ; Moiseyev, Vyacheslav ; Gromov, Andrei ; Pokutta, Dalia ; Saag, Lehti ; Varul, Liivi ; Yepiskoposyan, Levon ; Sicheritz-Pontén, Thomas ; Foley, Robert A. ; Lahr, Marta Mirazón ; Nielsen, Rasmus ; Kristiansen, Kristian ; Willerslev, Eske

Cell, 2015-10, Vol.163 (3), p.571-582 [Periódico revisado por pares]

United States: Elsevier Inc

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3
Analysis of 3800-year-old Yersinia pestis genomes suggests Bronze Age origin for bubonic plague
Analysis of 3800-year-old Yersinia pestis genomes suggests Bronze Age origin for bubonic plague
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Analysis of 3800-year-old Yersinia pestis genomes suggests Bronze Age origin for bubonic plague

Spyrou, Maria A ; Tukhbatova, Rezeda I ; Wang, Chuan-Chao ; Valtueña, Aida Andrades ; Lankapalli, Aditya K ; Kondrashin, Vitaly V ; Tsybin, Victor A ; Khokhlov, Aleksandr ; Kühnert, Denise ; Herbig, Alexander ; Bos, Kirsten I ; Krause, Johannes

Nature communications, 2018-06, Vol.9 (1), p.2234-10, Article 2234 [Periódico revisado por pares]

England: Nature Publishing Group

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4
A draft genome of Yersinia pestis from victims of the Black Death
A draft genome of Yersinia pestis from victims of the Black Death
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A draft genome of Yersinia pestis from victims of the Black Death

BOS, Kirsten I ; SCHUENEMANN, Verena J ; WOOD, James ; EARN, David J. D ; ANN HERRING, D ; BAUER, Peter ; POINAR, Hendrik N ; KRAUSE, Johannes ; BRIAN GOLDING, G ; BURBANO, Hernán A ; WAGLECHNER, Nicholas ; COOMBES, Brian K ; MCPHEE, Joseph B ; DEWITTE, Sharon N ; MEYER, Matthias ; SCHMEDES, Sarah

Nature (London), 2011-10, Vol.478 (7370), p.506-510 [Periódico revisado por pares]

London: Nature Publishing Group

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5
The Stone Age Plague and Its Persistence in Eurasia
The Stone Age Plague and Its Persistence in Eurasia
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The Stone Age Plague and Its Persistence in Eurasia

Andrades Valtueña, Aida ; Mittnik, Alissa ; Key, Felix M. ; Haak, Wolfgang ; Allmäe, Raili ; Belinskij, Andrej ; Daubaras, Mantas ; Feldman, Michal ; Jankauskas, Rimantas ; Janković, Ivor ; Massy, Ken ; Novak, Mario ; Pfrengle, Saskia ; Reinhold, Sabine ; Šlaus, Mario ; Spyrou, Maria A. ; Szécsényi-Nagy, Anna ; Tõrv, Mari ; Hansen, Svend ; Bos, Kirsten I. ; Stockhammer, Philipp W. ; Herbig, Alexander ; Krause, Johannes

Current biology, 2017-12, Vol.27 (23), p.3683-3691.e8 [Periódico revisado por pares]

England: Elsevier Ltd

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6
Stone Age Yersinia pestis genomes shed light on the early evolution, diversity, and ecology of plague
Stone Age Yersinia pestis genomes shed light on the early evolution, diversity, and ecology of plague
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Stone Age Yersinia pestis genomes shed light on the early evolution, diversity, and ecology of plague

Andrades Valtueña, Aida ; Neumann, Gunnar U ; Spyrou, Maria A ; Musralina, Lyazzat ; Aron, Franziska ; Beisenov, Arman ; Belinskiy, Andrey B ; Bos, Kirsten I ; Buzhilova, Alexandra ; Conrad, Matthias ; Djansugurova, Leyla B ; Dobeš, Miroslav ; Ernée, Michal ; Fernández-Eraso, Javier ; Frohlich, Bruno ; Furmanek, Mirosław ; Hałuszko, Agata ; Hansen, Svend ; Harney, Éadaoin ; Hiss, Alina N ; Hübner, Alexander ; Key, Felix M ; Khussainova, Elmira ; Kitov, Egor ; Kitova, Alexandra O ; Knipper, Corina ; Kühnert, Denise ; Lalueza-Fox, Carles ; Littleton, Judith ; Massy, Ken ; Mittnik, Alissa ; Mujika-Alustiza, José Antonio ; Olalde, Iñigo ; Papac, Luka ; Penske, Sandra ; Peška, Jaroslav ; Pinhasi, Ron ; Reich, David ; Reinhold, Sabine ; Stahl, Raphaela ; Stäuble, Harald ; Tukhbatova, Rezeda I ; Vasilyev, Sergey ; Veselovskaya, Elizaveta ; Warinner, Christina ; Stockhammer, Philipp W ; Haak, Wolfgang ; Krause, Johannes ; Herbig, Alexander

Proceedings of the National Academy of Sciences - PNAS, 2022-04, Vol.119 (17), p.e2116722119-e2116722119 [Periódico revisado por pares]

United States: National Academy of Sciences

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7
Retracing the Evolutionary Path that Led to Flea-Borne Transmission of Yersinia pestis
Retracing the Evolutionary Path that Led to Flea-Borne Transmission of Yersinia pestis
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Retracing the Evolutionary Path that Led to Flea-Borne Transmission of Yersinia pestis

Sun, Yi-Cheng ; Jarrett, Clayton O. ; Bosio, Christopher F. ; Hinnebusch, B. Joseph

Cell host & microbe, 2014-05, Vol.15 (5), p.578-586 [Periódico revisado por pares]

United States: Elsevier Inc

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8
A genomic and historical synthesis of plague in 18th century Eurasia
A genomic and historical synthesis of plague in 18th century Eurasia
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A genomic and historical synthesis of plague in 18th century Eurasia

Guellil, Meriam ; Kersten, Oliver ; Namouchi, Amine ; Luciani, Stefania ; Marota, Isolina ; Arcini, Caroline A. ; Iregren, Elisabeth ; Lindemann, Robert A. ; Warfvinge, Gunnar ; Bakanidze, Lela ; Bitadze, Lia ; Rubini, Mauro ; Zaio, Paola ; Zaio, Monica ; Neri, Damiano ; Stenseth, N. C. ; Bramanti, Barbara

Proceedings of the National Academy of Sciences - PNAS, 2020-11, Vol.117 (45), p.28328-28335 [Periódico revisado por pares]

United States: National Academy of Sciences

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9
Integrative approach using Yersinia pestis genomes to revisit the historical landscape of plague during the Medieval Period
Integrative approach using Yersinia pestis genomes to revisit the historical landscape of plague during the Medieval Period
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Integrative approach using Yersinia pestis genomes to revisit the historical landscape of plague during the Medieval Period

Namouchi, Amine ; Guellil, Meriam ; Kersten, Oliver ; Hänsch, Stephanie ; Ottoni, Claudio ; Schmid, Boris V. ; Pacciani, Elsa ; Quaglia, Luisa ; Vermunt, Marco ; Bauer, Egil L. ; Derrick, Michael ; Jensen, Anne Ø. ; Kacki, Sacha ; Cohn, Samuel K. ; Stenseth, Nils C. ; Bramanti, Barbara

Proceedings of the National Academy of Sciences - PNAS, 2018-12, Vol.115 (50), p.E11790-E11797 [Periódico revisado por pares]

United States: National Academy of Sciences

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10
Enabling the democratization of the genomics revolution with a fully integrated web-based bioinformatics platform
Enabling the democratization of the genomics revolution with a fully integrated web-based bioinformatics platform
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Enabling the democratization of the genomics revolution with a fully integrated web-based bioinformatics platform

Li, Po-E ; Lo, Chien-Chi ; Anderson, Joseph J ; Davenport, Karen W ; Bishop-Lilly, Kimberly A ; Xu, Yan ; Ahmed, Sanaa ; Feng, Shihai ; Mokashi, Vishwesh P ; Chain, Patrick S G

Nucleic acids research, 2017-01, Vol.45 (1), p.67-80 [Periódico revisado por pares]

England: Oxford University Press

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